Information for 1-TGCTGAGGGCAG (Motif 1)

A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C T G A G T C C T G A A C T G
Reverse Opposite:
A G T C A G C T C T A G A G T C A G T C A G T C A C G T A G T C G T C A A C T G A G T C C G T A
p-value:1e-235
log p-value:-5.413e+02
Information Content per bp:1.979
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif62.22%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.4 +/- 20.8bp
Average Position of motif in Background113.3 +/- 52.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:TGCTGAGGGCAG
---TNNGGGCAG
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C T G A G T C C T G A A C T G
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGCTGAGGGCAG
---TRAGGTCA-
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C T G A G T C C T G A A C T G
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGCTGAGGGCAG
AAAATGCTGACT----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C T G A G T C C T G A A C T G
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGCTGAGGGCAG
--CAAAGGTCAG
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C T G A G T C C T G A A C T G
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NRL/MA0842.2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TGCTGAGGGCAG
AAAAGTGCTGACG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C T G A G T C C T G A A C T G
C T G A C G T A C G T A G C T A C T A G G A C T C T A G T G A C A G C T C A T G C T G A A G T C C T A G A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCTGAGGGCAG
GCCTCAGGGCAT
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C T G A G T C C T G A A C T G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Plagl1/MA1615.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCTGAGGGCAG-
CCCTGGGGCCAGG
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C T G A G T C C T G A A C T G A C G T
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGAGGGCAG
CCCCCTGCTGTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C T G A G T C C T G A A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCTGAGGGCAG
TGCTGACTCA--
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C T G A G T C C T G A A C T G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T

Zic2/MA1629.1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGAGGGCAG
CCCCCTGCTGTGNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C T G A G T C C T G A A C T G
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G A C G T A C G T A C G T