Information for 11-AGCAATWATGTG (Motif 10)

C T G A C A T G A G T C C G T A C T G A A C G T G C T A T C G A A G C T C T A G A C G T A C T G
Reverse Opposite:
A G T C T C G A A G T C T C G A A G C T C G A T G T C A A G C T C G A T C T A G G T A C A G C T
p-value:1e-153
log p-value:-3.531e+02
Information Content per bp:1.788
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif61.11%
Number of Background Sequences with motif25.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets97.2 +/- 12.4bp
Average Position of motif in Background105.1 +/- 91.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nobox/MA0125.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGCAATWATGTG
ACCAATTA----
 C T G A C A T G A G T C C G T A C T G A A C G T G C T A T C G A A G C T C T A G A C G T A C T G
T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T A C G T A C G T A C G T

DLX5/MA1476.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCAATWATGTG
-GCAATTAC---
 C T G A C A T G A G T C C G T A C T G A A C G T G C T A T C G A A G C T C T A G A C G T A C T G
A C G T T A C G G A T C T G C A C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T

LHX1/MA1518.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGCAATWATGTG
-GCAATTAC---
 C T G A C A T G A G T C C G T A C T G A A C G T G C T A T C G A A G C T C T A G A C G T A C T G
A C G T A T C G G A T C T G C A G C T A A C G T A G C T C G T A T A G C A C G T A C G T A C G T

CDX2/MA0465.2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGCAATWATGTG
AAGCAATAAAAA-
 A C G T C T G A C A T G A G T C C G T A C T G A A C G T G C T A T C G A A G C T C T A G A C G T A C T G
C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A A C G T

HOXB8/MA1502.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGCAATWATGTG
-GCAATTAC---
 C T G A C A T G A G T C C G T A C T G A A C G T G C T A T C G A A G C T C T A G A C G T A C T G
A C G T A C T G A G T C T G C A C G T A A C G T C A G T C G T A T G A C A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGCAATWATGTG
NNNTAACAATTATAN-
 A C G T A C G T A C G T A C G T C T G A C A T G A G T C C G T A C T G A A C G T G C T A T C G A A G C T C T A G A C G T A C T G
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGCAATWATGTG--
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T C T G A C A T G A G T C C G T A C T G A A C G T G C T A T C G A A G C T C T A G A C G T A C T G A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGCAATWATGTG--
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T C T G A C A T G A G T C C G T A C T G A A C G T G C T A T C G A A G C T C T A G A C G T A C T G A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

HOXD8/MA0910.2/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGCAATWATGTG
-GCAATTAC---
 C T G A C A T G A G T C C G T A C T G A A C G T G C T A T C G A A G C T C T A G A C G T A C T G
A C G T T C A G A G T C T G C A C G T A A C G T C A G T C G T A T G A C A C G T A C G T A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGCAATWATGTG
-GCAATTAA---
 C T G A C A T G A G T C C G T A C T G A A C G T G C T A T C G A A G C T C T A G A C G T A C T G
A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T A C G T A C G T