Information for 15-TTGTTACC (Motif 22)

A C G T A C G T A C T G A G C T A C G T C G T A G T A C A G T C
Reverse Opposite:
A C T G A C T G A C G T C G T A C T G A G T A C C G T A C G T A
p-value:1e-66
log p-value:-1.535e+02
Information Content per bp:1.959
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif66.67%
Number of Background Sequences with motif1380.4
Percentage of Background Sequences with motif3.15%
Average Position of motif in Targets125.5 +/- 37.6bp
Average Position of motif in Background99.3 +/- 74.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTACC
ATTGTTTAN
 A C G T A C G T A C G T A C T G A G C T A C G T C G T A G T A C A G T C
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TTGTTACC
ATTGTT---
 A C G T A C G T A C G T A C T G A G C T A C G T C G T A G T A C A G T C
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TTGTTACC
ATTGTTA--
 A C G T A C G T A C G T A C T G A G C T A C G T C G T A G T A C A G T C
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:4
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------TTGTTACC-
CTATAATTGTTAGCG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C G T C G T A G T A C A G T C A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TTGTTACC
CCATTGTTNY-
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C G T C G T A G T A C A G T C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TTGTTACC
ACTAGTTAAC
 A C G T A C G T A C G T A C G T A C T G A G C T A C G T C G T A G T A C A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0159.1_Rfx4_2/Jaspar

Match Rank:7
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TTGTTACC--
TACCCTAGTTACCGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C G T C G T A G T A C A G T C A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTACC-----
AATNTTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C G T C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PB0059.1_Six6_1/Jaspar

Match Rank:9
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTACC-----
ANANNTGATACCCNATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C G T C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTACC---
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C G T C G T A G T A C A G T C A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T