Information for 23-AACTGCGTCTGC (Motif 24)

C G T A C G T A A G T C A C G T A C T G A G T C C T A G A C G T A G T C A C G T A C T G A G T C
Reverse Opposite:
C T A G A G T C C G T A A C T G C G T A A G T C A C T G A G T C C G T A C T A G A C G T A C G T
p-value:1e-45
log p-value:-1.039e+02
Information Content per bp:1.932
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif14.44%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets17.7 +/- 19.0bp
Average Position of motif in Background170.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HAND2/MA1638.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AACTGCGTCTGC-
---NNCATCTGNN
 C G T A C G T A A G T C A C G T A C T G A G T C C T A G A C G T A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

OSR2/MA1646.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AACTGCGTCTGC--
--NNGCTTCTGTNN
 C G T A C G T A A G T C A C G T A C T G A G T C C T A G A C G T A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AACTGCGTCTGC
--VBSYGTCTGG
 C G T A C G T A A G T C A C G T A C T G A G T C C T A G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

MYB/MA0100.3/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AACTGCGTCTGC
ACCAACTGTC-----
 A C G T A C G T A C G T C G T A C G T A A G T C A C G T A C T G A G T C C T A G A C G T A G T C A C G T A C T G A G T C
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C A C G T A C G T A C G T A C G T A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AACTGCGTCTGC---
--CAGCACCTGCCCC
 C G T A C G T A A G T C A C G T A C T G A G T C C T A G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

TCF4/MA0830.2/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AACTGCGTCTGC---
--CGGCACCTGCCCC
 C G T A C G T A A G T C A C G T A C T G A G T C C T A G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AACTGCGTCTGC---
---DGCAGCTGCYSS
 C G T A C G T A A G T C A C G T A C T G A G T C C T A G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

ASCL1/MA1100.2/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AACTGCGTCTGC-
---NGCAGCTGCN
 C G T A C G T A A G T C A C G T A C T G A G T C C T A G A C G T A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T T C A G T C A G G A T C G T C A A T C G T A G C C G A T C T A G A G T C A G T C

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AACTGCGTCTGC---
--NNCCATCTGTNNN
 C G T A C G T A A G T C A C G T A C T G A G T C C T A G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AACTGCGTCTGC--
--CAACGTCCGCGG
 C G T A C G T A A G T C A C G T A C T G A G T C C T A G A C G T A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G