Information for 24-TCTGCCAC (Motif 28)

A C G T A G T C A C G T A C T G G T A C A G T C C T G A A G T C
Reverse Opposite:
A C T G A G C T A C T G A C T G A G T C C G T A A C T G C G T A
p-value:1e-26
log p-value:-6.112e+01
Information Content per bp:1.922
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif34.44%
Number of Background Sequences with motif1064.2
Percentage of Background Sequences with motif2.43%
Average Position of motif in Targets11.3 +/- 14.6bp
Average Position of motif in Background102.3 +/- 74.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCCAC--
TGTCTGDCACCT
 A C G T A C G T A C G T A G T C A C G T A C T G G T A C A G T C C T G A A G T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TCTGCCAC--
CTGTCTGTCACCT
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G G T A C A G T C C T G A A G T C A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

ZNF75D/MA1601.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCTGCCAC--
TTTCCCACAN
 A C G T A G T C A C G T A C T G G T A C A G T C C T G A A G T C A C G T A C G T
G A C T A G C T C A G T T A G C G T A C A G T C C T G A A G T C G T C A A G C T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TCTGCCAC--
--TGCCAGCB
 A C G T A G T C A C G T A C T G G T A C A G T C C T G A A G T C A C G T A C G T
A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCTGCCAC-
VGCTGWCAVB
 A C G T A C G T A G T C A C G T A C T G G T A C A G T C C T G A A G T C A C G T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCTGCCAC
GGTCTGGCAT
 A C G T A C G T A C G T A G T C A C G T A C T G G T A C A G T C C T G A A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZFP57/MA1583.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCTGCCAC---
GCATTGCCGCAGT
 A C G T A C G T A C G T A G T C A C G T A C T G G T A C A G T C C T G A A G T C A C G T A C G T A C G T
A T C G A T G C T C G A A C G T A C G T A T C G G A T C T A G C C T A G A T G C T C G A T A C G A G C T

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCTGCCAC-
NANTGCSGCA
 A C G T A C G T A G T C A C G T A C T G G T A C A G T C C T G A A G T C A C G T
G A T C G C T A C A G T A C G T T A C G A G T C A T G C C T A G A G T C T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TCTGCCAC
VBSYGTCTGG---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G G T A C A G T C C T G A A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCTGCCAC-
-TTGCCAAG
 A C G T A G T C A C G T A C T G G T A C A G T C C T G A A G T C A C G T
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G