Information for 24-TAGTATAAARMA (Motif 29)

A C G T C G T A A C T G A C G T C G T A A C G T C G T A C G T A C G T A C T A G G T C A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T C G A T A C G T C G T A A C G T C G T A A G T C A C G T C G T A
p-value:1e-23
log p-value:-5.443e+01
Information Content per bp:1.921
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets91.0 +/- 2.1bp
Average Position of motif in Background60.9 +/- 40.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TAGTATAAARMA-----
--GTATAAAAGGCGGGG
 A C G T C G T A A C T G A C G T C G T A A C G T C G T A C G T A C G T A C T A G G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TAGTATAAARMA-----
--GTATAAAAGGCGGGG
 A C G T C G T A A C T G A C G T C G T A A C G T C G T A C G T A C G T A C T A G G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TAGTATAAARMA
CCGTATTATAAACAA
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C G T C G T A C G T A C G T A C T A G G T C A C G T A
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0019.1_Foxl1_1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAGTATAAARMA----
TAAATGTAAACAAAGGT
 A C G T A C G T C G T A A C T G A C G T C G T A A C G T C G T A C G T A C G T A C T A G G T C A C G T A A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAGTATAAARMA
AATATTAATAAAGA
 A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C G T C G T A C G T A C G T A C T A G G T C A C G T A
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAGTATAAARMA
WWATRTAAACAN
 A C G T C G T A A C T G A C G T C G T A A C G T C G T A C G T A C G T A C T A G G T C A C G T A
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAGTATAAARMA-
-WWTRTAAACAVG
 A C G T C G T A A C T G A C G T C G T A A C G T C G T A C G T A C G T A C T A G G T C A C G T A A C G T
A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TAGTATAAARMA--
---AATAAACAATN
 A C G T C G T A A C T G A C G T C G T A A C G T C G T A C G T A C G T A C T A G G T C A C G T A A C G T A C G T
A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

PB0079.1_Sry_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TAGTATAAARMA-
NANTATTATAATTNNN
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C G T C G T A C G T A C G T A C T A G G T C A C G T A A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAGTATAAARMA
NGYCATAAAWCH
 A C G T C G T A A C T G A C G T C G T A A C G T C G T A C G T A C G T A C T A G G T C A C G T A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A