Information for 3-AAGCAGCTGACC (Motif 3)

C G T A C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C G T
p-value:1e-213
log p-value:-4.920e+02
Information Content per bp:1.530
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif61.11%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets123.1 +/- 9.4bp
Average Position of motif in Background119.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AAGCAGCTGACC
-ANCAGCTG---
 C G T A C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C A G T C
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AAGCAGCTGACC
-AGCAGCTGCT-
 C G T A C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C A G T C
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AAGCAGCTGACC-
-DGCAGCTGCYSS
 C G T A C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C A G T C A C G T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AAGCAGCTGACC
NNAGCAGCTGCT-
 A C G T C G T A C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C A G T C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAGCAGCTGACC
NAHCAGCTGD--
 C G T A C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C A G T C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

MYOG/MA0500.2/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAGCAGCTGACC
CAGCAGCTGCTG
 C G T A C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C A G T C
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AAGCAGCTGACC
-AACAGCTG---
 C G T A C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C A G T C
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AAGCAGCTGACC
CAGCAGCTGN--
 C G T A C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C A G T C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

ATOH1(var.2)/MA1467.1/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAGCAGCTGACC
-AACAGCTGTC-
 C G T A C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C A G T C
A C G T T C G A T C G A A G T C C G T A A C T G G T A C A C G T A C T G G A C T A G T C A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAGCAGCTGACC
-AACAGCTGAT-
 C G T A C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C A G T C
A C G T T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T