Information for 16-CCCCAAGCGCAG (Motif 11)

A G T C A G T C A G T C A G T C G T C A C T G A A C T G A G T C C T A G A G T C C T G A C T A G
Reverse Opposite:
A G T C A G C T C T A G A G T C T C A G A G T C A G C T A C G T A C T G C T A G A C T G A C T G
p-value:1e-137
log p-value:-3.168e+02
Information Content per bp:1.829
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif57.78%
Number of Background Sequences with motif32.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets41.9 +/- 4.8bp
Average Position of motif in Background118.7 +/- 70.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCCCAAGCGCAG
TGCCCNNAGGGCA-
 A C G T A C G T A G T C A G T C A G T C A G T C G T C A C T G A A C T G A G T C C T A G A G T C C T G A C T A G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCCCAAGCGCAG
TGCCCTNAGGGCA-
 A C G T A C G T A G T C A G T C A G T C A G T C G T C A C T G A A C T G A G T C C T A G A G T C C T G A C T A G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCCCAAGCGCAG
TGCCCTNAGGGCA-
 A C G T A C G T A G T C A G T C A G T C A G T C G T C A C T G A A C T G A G T C C T A G A G T C C T G A C T A G
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

EBF3/MA1637.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCCCAAGCGCAG
TTCCCAAGGGAAT
 A C G T A G T C A G T C A G T C A G T C G T C A C T G A A C T G A G T C C T A G A G T C C T G A C T A G
A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G T C A G T C G A T G C A G C A T

GLIS2/MA0736.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCCCAAGCGCAG
GACCCCCCGCGAAG
 A C G T A C G T A G T C A G T C A G T C A G T C G T C A C T G A A C T G A G T C C T A G A G T C C T G A C T A G
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

Ebf2/MA1604.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCCAAGCGCAG
TTCCCAAGGGACT
 A C G T A G T C A G T C A G T C A G T C G T C A C T G A A C T G A G T C C T A G A G T C C T G A C T A G
A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G C T A G T C G A T G A C G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCCCAAGCGCAG
--CCAGGAACAG
 A G T C A G T C A G T C A G T C G T C A C T G A A C T G A G T C C T A G A G T C C T G A C T A G
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCCCAAGCGCAG
--CAAAGGTCAG
 A G T C A G T C A G T C A G T C G T C A C T G A A C T G A G T C C T A G A G T C C T G A C T A G
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

EBF1/MA0154.4/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCCCAAGCGCAG
AGTCCCCAGGGGACT
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C G T C A C T G A A C T G A G T C C T A G A G T C C T G A C T A G
C G T A C T A G A C G T A G T C G A T C G A T C G T A C C G T A C T A G C T A G C T A G T C A G T G C A G T A C G C A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCCAAGCGCAG
AGCCTCAGGCA---
 A C G T A C G T A G T C A G T C A G T C A G T C G T C A C T G A A C T G A G T C C T A G A G T C C T G A C T A G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T