Information for 20-TMTATAGGAACA (Motif 17)

A G C T G T A C A C G T C G T A A C G T C G T A A C T G A C T G G T C A C T G A A G T C G T C A
Reverse Opposite:
A C G T C T A G A G C T A C G T G T A C A G T C A C G T C G T A A C G T C G T A A C T G C T G A
p-value:1e-71
log p-value:-1.637e+02
Information Content per bp:1.920
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.8 +/- 3.8bp
Average Position of motif in Background119.4 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX1/MA0509.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TMTATAGGAACA-
TNCCATAGCAACNN
 A C G T A G C T G T A C A C G T C G T A A C G T C G T A A C T G A C T G G T C A C T G A A G T C G T C A A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TMTATAGGAACA-
---CCAGGAACAG
 A G C T G T A C A C G T C G T A A C G T C G T A A C T G A C T G G T C A C T G A A G T C G T C A A C G T
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0006.1_Bcl6b_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TMTATAGGAACA--
TCTTTCGAGGAATTTG
 A C G T A C G T A G C T G T A C A C G T C G T A A C G T C G T A A C T G A C T G G T C A C T G A A G T C G T C A A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

RFX3/MA0798.2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TMTATAGGAACA-
TNCCATAGCAACNN
 A C G T A G C T G T A C A C G T C G T A A C G T C G T A A C T G A C T G G T C A C T G A A G T C G T C A A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

RFX7/MA1554.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TMTATAGGAACA
---NTAGCAACG
 A G C T G T A C A C G T C G T A A C G T C G T A A C T G A C T G G T C A C T G A A G T C G T C A
A C G T A C G T A C G T C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------TMTATAGGAACA
NNNNNNCTTTTATAN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T A C A C G T C G T A A C G T C G T A A C T G A C T G G T C A C T G A A G T C G T C A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------TMTATAGGAACA
NNNNNNCTTTTATAN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T A C A C G T C G T A A C G T C G T A A C T G A C T G G T C A C T G A A G T C G T C A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TMTATAGGAACA-
-SCCTAGCAACAG
 A G C T G T A C A C G T C G T A A C G T C G T A A C T G A C T G G T C A C T G A A G T C G T C A A C G T
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

BCL6/MA0463.2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TMTATAGGAACA
ATGCTTTCGAGGAATT
 A C G T A C G T A C G T A C G T A G C T G T A C A C G T C G T A A C G T C G T A A C T G A C T G G T C A C T G A A G T C G T C A
G C T A G A C T C T A G G T A C G C A T A C G T G C A T A G T C A C T G G C T A C T A G A C T G C T G A C G T A G A C T C A G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TMTATAGGAACA---
-----TGGAACAGMA
 A G C T G T A C A C G T C G T A A C G T C G T A A C T G A C T G G T C A C T G A A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A