Information for 2-AGCAGCTGACCA (Motif 2)

C G T A A C T G A T G C C G T A C T A G A G T C A C G T A C T G C G T A A G T C A G T C C G T A
Reverse Opposite:
C G A T C T A G A C T G A C G T A G T C G T C A A C T G A G T C A C G T A T C G A G T C A C G T
p-value:1e-234
log p-value:-5.394e+02
Information Content per bp:1.973
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif72.22%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets123.2 +/- 14.8bp
Average Position of motif in Background59.1 +/- 55.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGCAGCTGACCA
ANCAGCTG----
 C G T A A C T G A T G C C G T A C T A G A G T C A C G T A C T G C G T A A G T C A G T C C G T A
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AGCAGCTGACCA
NNAGCAGCTGCT--
 A C G T A C G T C G T A A C T G A T G C C G T A C T A G A G T C A C G T A C T G C G T A A G T C A G T C C G T A
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGCAGCTGACCA
AGCAGCTGCT--
 C G T A A C T G A T G C C G T A C T A G A G T C A C G T A C T G C G T A A G T C A G T C C G T A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGCTGACCA-
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T C G T A A C T G A T G C C G T A C T A G A G T C A C G T A C T G C G T A A G T C A G T C C G T A A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MYOG/MA0500.2/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGCAGCTGACCA
CAGCAGCTGCTG-
 A C G T C G T A A C T G A T G C C G T A C T A G A G T C A C G T A C T G C G T A A G T C A G T C C G T A
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGCAGCTGACCA
AACAGCTG----
 C G T A A C T G A T G C C G T A C T A G A G T C A C G T A C T G C G T A A G T C A G T C C G T A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCTGACCA
CAGCAGCTGN---
 A C G T C G T A A C T G A T G C C G T A C T A G A G T C A C G T A C T G C G T A A G T C A G T C C G T A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGCAGCTGACCA
NAHCAGCTGD---
 A C G T C G T A A C T G A T G C C G T A C T A G A G T C A C G T A C T G C G T A A G T C A G T C C G T A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T

ATOH1(var.2)/MA1467.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGCAGCTGACCA
AACAGCTGTC--
 C G T A A C T G A T G C C G T A C T A G A G T C A C G T A C T G C G T A A G T C A G T C C G T A
T C G A T C G A A G T C C G T A A C T G G T A C A C G T A C T G G A C T A G T C A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGCAGCTGACCA
AACAGCTGAT--
 C G T A A C T G A T G C C G T A C T A G A G T C A C G T A C T G C G T A A G T C A G T C C G T A
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T A C G T