Information for 5-CTGAGGGCAGTC (Motif 4)

A G T C A C G T A C T G C G T A A C T G C A T G C T A G G T A C C T G A C A T G A G C T A G T C
Reverse Opposite:
C T A G C T G A G A T C A G C T C A T G A G T C G T A C A G T C A C G T A G T C C G T A A C T G
p-value:1e-204
log p-value:-4.709e+02
Information Content per bp:1.859
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif80.00%
Number of Background Sequences with motif35.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets29.9 +/- 5.1bp
Average Position of motif in Background99.5 +/- 66.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTGAGGGCAGTC
-TNNGGGCAG--
 A G T C A C G T A C T G C G T A A C T G C A T G C T A G G T A C C T G A C A T G A G C T A G T C
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTGAGGGCAGTC
GCCTCAGGGCAT--
 A C G T A C G T A G T C A C G T A C T G C G T A A C T G C A T G C T A G G T A C C T G A C A T G A G C T A G T C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

TFAP2A/MA0003.4/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGGGCAGTC
NNGCCTGAGGCANN--
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G C A T G C T A G G T A C C T G A C A T G A G C T A G T C
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTGAGGGCAGTC
SCCTSAGGSCAW--
 A C G T A C G T A G T C A C G T A C T G C G T A A C T G C A T G C T A G G T A C C T G A C A T G A G C T A G T C
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTGAGGGCAGTC
-TRAGGTCA---
 A G T C A C G T A C T G C G T A A C T G C A T G C T A G G T A C C T G A C A T G A G C T A G T C
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTGAGGGCAGTC
GGGCCTGAGGCGGG--
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G C A T G C T A G G T A C C T G A C A T G A G C T A G T C
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTGAGGGCAGTC
TCACCTCTGGGCAG--
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G C A T G C T A G G T A C C T G A C A T G A G C T A G T C
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGAGGGCAGTC
CAAAGGTCAG--
 A G T C A C G T A C T G C G T A A C T G C A T G C T A G G T A C C T G A C A T G A G C T A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTGAGGGCAGTC
TTGCCCTAGGGCAT--
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G C A T G C T A G G T A C C T G A C A T G A G C T A G T C
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTGAGGGCAGTC
TGCCCNGGGGCA---
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G C A T G C T A G G T A C C T G A C A T G A G C T A G T C
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T