Information for 1-HTGTTTCTCTGT (Motif 1)

G A C T A C G T A C T G A G C T A C G T C G A T G T A C A G C T A T G C A C G T C T A G G C A T
Reverse Opposite:
C G T A G A T C C G T A T A C G C T G A C A T G G C T A T G C A C T G A T G A C C G T A C T G A
p-value:1e-311
log p-value:-7.167e+02
Information Content per bp:1.729
Number of Target Sequences with motif390.0
Percentage of Target Sequences with motif87.64%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets555.8 +/- 378.3bp
Average Position of motif in Background417.4 +/- 121.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)2.62
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRSF10(RRM)/Homo_sapiens-RNCMPT00019-PBM/HughesRNA

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:HTGTTTCTCTGT
---TTTCTCT--
 G A C T A C G T A C T G A G C T A C G T C G A T G T A C A G C T A T G C A C G T C T A G G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T

SRSF10(RRM)/Homo_sapiens-RNCMPT00090-PBM/HughesRNA

Match Rank:2
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:HTGTTTCTCTGT
---TTTCTCT--
 G A C T A C G T A C T G A G C T A C G T C G A T G T A C A G C T A T G C A C G T C T A G G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T

SRSF10(RRM)/Homo_sapiens-RNCMPT00089-PBM/HughesRNA

Match Rank:3
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:HTGTTTCTCTGT
---TTTCTCT--
 G A C T A C G T A C T G A G C T A C G T C G A T G T A C A G C T A T G C A C G T C T A G G C A T
A C G T A C G T A C G T A G C T A G C T A G C T A G T C A C G T A G T C A C G T A C G T A C G T

BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--HTGTTTCTCTGT-
YTYTCTCTCTCTCTA
 A C G T A C G T G A C T A C G T A C T G A G C T A C G T C G A T G T A C A G C T A T G C A C G T C T A G G C A T A C G T
G A T C G A C T G A C T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T G T A C C G A T G T C A

GAGA-repeat/SacCer-Promoters/Homer

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--HTGTTTCTCTGT-
CTYTCTYTCTCTCTC
 A C G T A C G T G A C T A C G T A C T G A G C T A C G T C G A T G T A C A G C T A T G C A C G T C T A G G C A T A C G T
G A T C G C A T A G T C A G C T G A T C A G C T G A T C G A C T G A T C G A C T A G T C A C G T G A T C A G C T G A T C

Stat2/MA1623.1/Jaspar

Match Rank:6
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:HTGTTTCTCTGT--
-NNTTTCTGTTTCT
 G A C T A C G T A C T G A G C T A C G T C G A T G T A C A G C T A T G C A C G T C T A G G C A T A C G T A C G T
A C G T C G T A A T C G A G C T G A C T A G C T G A T C C G A T A T C G A G C T C G A T G A C T G A T C G A C T

Tb_0253(RRM)/Trypanosoma_brucei-RNCMPT00253-PBM/HughesRNA

Match Rank:7
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:HTGTTTCTCTGT
-TTTTTCT----
 G A C T A C G T A C T G A G C T A C G T C G A T G T A C A G C T A T G C A C G T C T A G G C A T
A C G T A G C T A G C T A C G T A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T

Nv_0278(RRM)/Nematostella_vectensis-RNCMPT00278-PBM/HughesRNA

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:HTGTTTCTCTGT
NTGTGTCT----
 G A C T A C G T A C T G A G C T A C G T C G A T G T A C A G C T A T G C A C G T C T A G G C A T
G T C A A C G T T A C G A C G T C T A G A C G T A T G C A C G T A C G T A C G T A C G T A C G T

RNP4F(RRM)/Drosophila_melanogaster-RNCMPT00060-PBM/HughesRNA

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:HTGTTTCTCTGT
---CTTCTCT--
 G A C T A C G T A C T G A G C T A C G T C G A T G T A C A G C T A T G C A C G T C T A G G C A T
A C G T A C G T A C G T G A T C A G C T A G C T T G A C A C G T A G T C A C G T A C G T A C G T

Trl/MA0205.2/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:HTGTTTCTCTGT-
-TCTCTCTCTTNN
 G A C T A C G T A C T G A G C T A C G T C G A T G T A C A G C T A T G C A C G T C T A G G C A T A C G T
A C G T A G C T A G T C A C G T G A T C A C G T T A G C G C A T G T A C C G A T A G C T A G C T A G T C