Information for 4-CTCAGTMTYT (Motif 10)

A G T C A C G T A G T C C G T A A C T G A C G T G T A C A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G C G T A C A T G G T C A A G T C A C G T A C T G C G T A A C T G
p-value:1e-259
log p-value:-5.977e+02
Information Content per bp:1.908
Number of Target Sequences with motif343.0
Percentage of Target Sequences with motif77.08%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets801.8 +/- 207.0bp
Average Position of motif in Background429.9 +/- 160.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.64
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Initiator/Drosophila-Promoters/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CTCAGTMTYT
NTCAGTYG--
 A G T C A C G T A G T C C G T A A C T G A C G T G T A C A C G T A G T C A C G T
G C A T A C G T A T G C C T G A C T A G G A C T G A T C A C T G A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTCAGTMTYT
-TCAGTCTT-
 A G T C A C G T A G T C C G T A A C T G A C G T G T A C A C G T A G T C A C G T
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CTCAGTMTYT--
GCAACCTCATTATNNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A C G T G T A C A C G T A G T C A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

eor-1/MA0543.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGTMTYT--
TCTCTGCGTCTCTNN
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A C G T G T A C A C G T A G T C A C G T A C G T A C G T
G A C T A T G C G A C T A G T C A C G T A T C G G A T C A T C G G A C T G A T C C G A T G A T C A G C T G A T C G A C T

REF6/MA1415.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGTMTYT
TNCTCTGTTTT-
 A C G T A C G T A G T C A C G T A G T C C G T A A C T G A C G T G T A C A C G T A G T C A C G T
C G A T T C A G G T A C G A C T T G A C A G C T C T A G A G C T C G A T G A C T G A C T A C G T

STZ(C2H2)/colamp-STZ-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTCAGTMTYT
HNBTCACT----
 A C G T A C G T A G T C A C G T A G T C C G T A A C T G A C G T G T A C A C G T A G T C A C G T
G A T C G C T A A G C T G C A T A G T C C T G A T A G C G A C T A C G T A C G T A C G T A C G T

REF6(Zf)/Arabidopsis-REF6-ChIP-Seq(GSE106942)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCAGTMTYT
TVCTCTGTTT--
 A C G T A C G T A G T C A C G T A G T C C G T A A C T G A C G T G T A C A C G T A G T C A C G T
A C G T T G A C A G T C A G C T A G T C A G C T A C T G G A C T A G C T G A C T A C G T A C G T

CG2931(RRM)/Drosophila_melanogaster-RNCMPT00147-PBM/HughesRNA

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCAGTMTYT
CTTAGTT---
 A G T C A C G T A G T C C G T A A C T G A C G T G T A C A C G T A G T C A C G T
A G T C A C G T A C G T C G T A A C T G A C G T G C A T A C G T A C G T A C G T

MET31/Literature(Harbison)/Yeast

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGTMTYT
CCACAGTTT--
 A C G T A G T C A C G T A G T C C G T A A C T G A C G T G T A C A C G T A G T C A C G T
A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T

MET32/Literature(Harbison)/Yeast

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGTMTYT
CCACAGTTT--
 A C G T A G T C A C G T A G T C C G T A A C T G A C G T G T A C A C G T A G T C A C G T
A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T