Information for 7-CCTYTGCYCA (Motif 12)

A G T C A G T C A C G T A G C T A C G T A C T G A G T C A G C T A G T C C G T A
Reverse Opposite:
C G A T A C T G C T G A A C T G A G T C C G T A T C G A C G T A C T A G A C T G
p-value:1e-247
log p-value:-5.694e+02
Information Content per bp:1.911
Number of Target Sequences with motif344.0
Percentage of Target Sequences with motif77.30%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets477.1 +/- 225.1bp
Average Position of motif in Background541.1 +/- 202.7bp
Strand Bias (log2 ratio + to - strand density)8.0
Multiplicity (# of sites on avg that occur together)1.55
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAC1/MA0326.1/Jaspar

Match Rank:1
Score:0.79
Offset:2
Orientation:forward strand
Alignment:CCTYTGCYCA
--TTTGCTCA
 A G T C A G T C A C G T A G C T A C G T A C T G A G T C A G C T A G T C C G T A
A C G T A C G T C G A T C A G T A C G T C T A G A G T C A C G T A G T C C T G A

MAC1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CCTYTGCYCA
--TTTGCTC-
 A G T C A G T C A C G T A G C T A C G T A C T G A G T C A G C T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CCTYTGCYCA-
TGACCTTTGCCCTA
 A C G T A C G T A C G T A G T C A G T C A C G T A G C T A C G T A C T G A G T C A G C T A G T C C G T A A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCTYTGCYCA--
TGACCTTTGCCCTAN
 A C G T A C G T A C G T A G T C A G T C A C G T A G C T A C G T A C T G A G T C A G C T A G T C C G T A A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCTYTGCYCA-
TGACCTTTGCCCCA
 A C G T A C G T A C G T A G T C A G T C A C G T A G C T A C G T A C T G A G T C A G C T A G T C C G T A A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:6
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCTYTGCYCA--
TGACCTTTGMCCTNB
 A C G T A C G T A C G T A G T C A G T C A C G T A G C T A C G T A C T G A G T C A G C T A G T C C G T A A C G T A C G T
G C A T T C A G T G C A G T A C G A T C A G C T A G C T A C G T T A C G T G C A G A T C G A T C G A C T G C T A A C T G

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCTYTGCYCA--
CYWSTGGTCARA
 A G T C A G T C A C G T A G C T A C G T A C T G A G T C A G C T A G T C C G T A A C G T A C G T
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCTYTGCYCA---
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G C T A C G T A C T G A G T C A G C T A G T C C G T A A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTYTGCYCA
YCTTTGTTCC
 A G T C A G T C A C G T A G C T A C G T A C T G A G T C A G C T A G T C C G T A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

pan/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTYTGCYCA-
CCTTTGATCTT
 A G T C A G T C A C G T A G C T A C G T A C T G A G T C A G C T A G T C C G T A A C G T
A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T