Information for 11-CTGAGGGAACTC (Motif 16)

A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C T G
p-value:1e-230
log p-value:-5.297e+02
Information Content per bp:1.530
Number of Target Sequences with motif304.0
Percentage of Target Sequences with motif68.31%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets759.4 +/- 174.8bp
Average Position of motif in Background604.3 +/- 216.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.4/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGGGAACTC
NNGCCTGAGGCANN--
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C G T A G T C
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T A C G T A C G T

RBM5(Znf)/Homo_sapiens-RNCMPT00055-PBM/HughesRNA

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTGAGGGAACTC
--GAAGGAA---
 A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C G T A G T C
A C G T A C G T C T A G C G T A C T G A A C T G A C T G C G T A C T G A A C G T A C G T A C G T

HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGAGGGAACTC
-TGATGGAW---
 A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C G T A G T C
A C G T A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T

Su(H)/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGAGGGAACTC
-CGTGGGAAC--
 A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C G T A G T C
A C G T A G T C C A T G A C G T A C T G C T A G A C T G C G T A C G T A G T A C A C G T A C G T

Su(H)/MA0085.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGAGGGAACTC----
CTGTGGGAAACGAGAT
 A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A G C T A C T G A C G T A C T G C T A G A C T G C G T A C G T A G T A C A G T C A C T G C G T A C T A G T G C A C A G T

dl-B/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTGAGGGAACTC--
---GGGGAATTCCC
 A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C A T G A T C G A C T G A C T G C G T A G C T A C G A T G A C T G A T C A G T C T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTGAGGGAACTC
SCCTSAGGSCAW--
 A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C G T A G T C
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

dl/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTGAGGGAACTC--
----GGGAAATCCC
 A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A C T G T C A G T C G A C G T A G C T A G A C T A G T C T G A C T G A C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTGAGGGAACTC
GCCTCAGGGCAT--
 A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C G T A G T C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

PCBP3(KH)/Mus_musculus-RNCMPT00215-PBM/HughesRNA

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTGAGGGAACTC
---AGGGAAAG-
 A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C G T A G T C
A C G T A C G T A C G T C G T A A C T G A C T G C T A G C G T A C G T A C T G A C A T G A C G T