Information for 14-CTCGTCCCACCT (Motif 19)

A G T C A C G T A T G C A C T G A C G T G A T C A G T C A G T C C G T A A T G C A G T C C A G T
Reverse Opposite:
G T C A C T A G A T C G A C G T A C T G A C T G C T A G G T C A A G T C T A C G C G T A A C T G
p-value:1e-219
log p-value:-5.048e+02
Information Content per bp:1.884
Number of Target Sequences with motif305.0
Percentage of Target Sequences with motif68.54%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets832.5 +/- 209.0bp
Average Position of motif in Background534.4 +/- 217.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCP20(TCP)/col-TCP20-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTCGTCCCACCT
--GGDCCCAC--
 A G T C A C G T A T G C A C T G A C G T G A T C A G T C A G T C C G T A A T G C A G T C C A G T
A C G T A C G T A C T G A C T G C A T G G A T C A G T C A G T C C T G A A G T C A C G T A C G T

At5g08330(TCP)/col-At5g08330-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTCGTCCCACCT
--GGRCCCAC--
 A G T C A C G T A T G C A C T G A C G T G A T C A G T C A G T C C G T A A T G C A G T C C A G T
A C G T A C G T A C T G A C T G C T A G G A T C A G T C A G T C C T G A A G T C A C G T A C G T

At1g72010(TCP)/colamp-At1g72010-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTCGTCCCACCT
--GGDCCCAC--
 A G T C A C G T A T G C A C T G A C G T G A T C A G T C A G T C C G T A A T G C A G T C C A G T
A C G T A C G T A C T G A C T G C T A G G A T C A G T C A G T C C T G A A G T C A C G T A C G T

FXR2(KH)/Homo_sapiens-RNCMPT00020-PBM/HughesRNA

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTCGTCCCACCT
CCCGTCC-----
 A G T C A C G T A T G C A C T G A C G T G A T C A G T C A G T C C G T A A T G C A G T C C A G T
A G T C A G T C A G T C A C T G A C G T A G T C G A T C A C G T A C G T A C G T A C G T A C G T

PCF2(TCP)/Oryza sativa/AthaMap

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTCGTCCCACCT
TGGGGCCCAC--
 A G T C A C G T A T G C A C T G A C G T G A T C A G T C A G T C C G T A A T G C A G T C C A G T
G C A T C T A G C A T G T A C G T A C G T A G C A T G C A G T C C T G A A G T C A C G T A C G T

Glyma19g26560.1/MA1019.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTCGTCCCACCT
-GGGGCCCAC--
 A G T C A C G T A T G C A C T G A C G T G A T C A G T C A G T C C G T A A T G C A G T C C A G T
A C G T A C T G C A T G C T A G A T C G G A T C T G A C G A T C T C G A A G T C A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:7
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTCGTCCCACCT
----TCACACCT
 A G T C A C G T A T G C A C T G A C G T G A T C A G T C A G T C C G T A A T G C A G T C C A G T
A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

OsI_08196/MA1050.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTCGTCCCACCT
--GGGCCCAC--
 A G T C A C G T A T G C A C T G A C G T G A T C A G T C A G T C C G T A A T G C A G T C C A G T
A C G T A C G T A C T G C T A G A C T G A G T C A G T C A G T C T C G A A G T C A C G T A C G T

YPR022C/MA0436.1/Jaspar

Match Rank:9
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CTCGTCCCACCT
----CCCCACG-
 A G T C A C G T A T G C A C T G A C G T G A T C A G T C A G T C C G T A A T G C A G T C C A G T
A C G T A C G T A C G T A C G T G A T C A G T C A G T C A G T C C G T A A G T C T A C G A C G T

At1g69690(TCP)/colamp-At1g69690-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTCGTCCCACCT
NHGTGGGGCCCACHW
 A C G T A C G T A C G T A G T C A C G T A T G C A C T G A C G T G A T C A G T C A G T C C G T A A T G C A G T C C A G T
G C T A G C A T T A C G A G C T C A T G A C T G C A T G C A T G G A T C A G T C A G T C C T G A A G T C G T A C G C T A