Information for 13-HTTGTTAACA (Motif 21)

G C A T A G C T A C G T A C T G C A G T C G A T C T G A C G T A T G A C G T C A
Reverse Opposite:
A C G T A C T G C G A T A G C T C G T A G T C A T A G C T G C A C T G A C G T A
p-value:1e-217
log p-value:-5.006e+02
Information Content per bp:1.825
Number of Target Sequences with motif322.0
Percentage of Target Sequences with motif72.36%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif1.59%
Average Position of motif in Targets219.5 +/- 39.1bp
Average Position of motif in Background439.7 +/- 318.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.77
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--HTTGTTAACA-----
TGATTGTTAACAGTTGG
 A C G T A C G T G C A T A G C T A C G T A C T G C A G T C G A T C T G A C G T A T G A C G T C A A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

SRY/MA0084.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:HTTGTTAACA
ATTGTTTAN-
 G C A T A G C T A C G T A C T G C A G T C G A T C T G A C G T A T G A C G T C A
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T

CG11617/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:HTTGTTAACA
NNTGTTAAAA
 G C A T A G C T A C G T A C T G C A G T C G A T C T G A C G T A T G A C G T C A
A C G T C G T A A C G T A C T G A C G T G C A T C G T A C G T A G C T A G C A T

FKH1/MA0296.1/Jaspar

Match Rank:4
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----HTTGTTAACA-----
TCNNCTTTGTTTACAATTNN
 A C G T A C G T A C G T A C G T A C G T G C A T A G C T A C G T A C T G C A G T C G A T C T G A C G T A T G A C G T C A A C G T A C G T A C G T A C G T A C G T
A G C T G T A C G A T C G A C T A G T C G C A T C G A T G C A T C T A G G C A T C A G T C A G T C G T A A G T C T C G A G C T A G C A T G C A T G A T C T C G A

FOXN3/MA1489.1/Jaspar

Match Rank:5
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:HTTGTTAACA
-TTGTTTAC-
 G C A T A G C T A C G T A C T G C A G T C G A T C T G A C G T A T G A C G T C A
A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----HTTGTTAACA---
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T G C A T A G C T A C G T A C T G C A G T C G A T C T G A C G T A T G A C G T C A A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:7
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---HTTGTTAACA----
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T G C A T A G C T A C G T A C T G C A G T C G A T C T G A C G T A T G A C G T C A A C G T A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

FKH1/FKH1_YPD/53-FKH1,53-FKH2(Harbison)/Yeast

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:HTTGTTAACA
-TTGTTTAC-
 G C A T A G C T A C G T A C T G C A G T C G A T C T G A C G T A T G A C G T C A
A C G T G A C T A C G T C T A G A G C T A C G T A C G T T C G A A G T C A C G T

FKH1(MacIsaac)/Yeast

Match Rank:9
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:HTTGTTAACA---
-TTGTTTACNTTT
 G C A T A G C T A C G T A C T G C A G T C G A T C T G A C G T A T G A C G T C A A C G T A C G T A C G T
A C G T G C A T A G C T C T A G A G C T A G C T A C G T G C T A G A T C T G A C G A C T G A C T G A C T

GT-1/MA1020.1/Jaspar

Match Rank:10
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:HTTGTTAACA
-TGGTTAAC-
 G C A T A G C T A C G T A C T G C A G T C G A T C T G A C G T A T G A C G T C A
A C G T A C G T C T A G A C T G A C G T A C G T C G T A C T G A T G A C A C G T