Information for 12-TCTCCTGC (Motif 30)

A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C C G T A A C T G C T A G C G T A A C T G C G T A
p-value:1e-199
log p-value:-4.582e+02
Information Content per bp:1.944
Number of Target Sequences with motif300.0
Percentage of Target Sequences with motif67.42%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets527.8 +/- 149.6bp
Average Position of motif in Background453.0 +/- 247.7bp
Strand Bias (log2 ratio + to - strand density)7.5
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRSF2(RRM)/Homo_sapiens-RNCMPT00072-PBM/HughesRNA

Match Rank:1
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TCTCCTGC
CNTCTCCT--
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C
A G T C G A T C G C A T A G T C C G A T A G T C A G T C A C G T A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00110-PBM/HughesRNA

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TCTCCTGC
NTGTCCTG-
 A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C
A C G T A C G T T A C G A C G T A G T C A G T C A C G T A C T G A C G T

LIN28A(CSD,Znf)/Homo_sapiens-RNCMPT00036-PBM/HughesRNA

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TCTCCTGC
TTCTCCN--
 A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C
A G C T C G A T A G T C A C G T A G T C A G T C C A T G A C G T A C G T

RAV1(2)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TCTCCTGC---
ATCACCTGAGGC
 A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C A C G T A C G T A C G T
G C T A G A C T G T A C C G T A A G T C A G T C A C G T A C T G T C G A T A C G T A C G G A T C

RAV1(var.2)/MA0583.1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TCTCCTGC---
ATCACCTGAGGC
 A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C A C G T A C G T A C G T
G C T A G A C T G T A C C G T A A G T C A G T C A C G T A C T G T C G A T A C G T A C G G A T C

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TCTCCTGC--
CGCACCTGCCG
 A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C A C G T A C G T
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:7
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TCTCCTGC-
-TNCCTGCA
 A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C A C G T
A C G T A G C T A C G T A T G C T G A C A G C T A C T G G A T C T C G A

TCF3/MA0522.3/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TCTCCTGC--
CGCACCTGCCC
 A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C A C G T A C G T
T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C

ttk/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TCTCCTGC
GGTCCTGC
 A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C
A C T G C T A G A C G T A G T C A G T C A G C T A C T G T A G C

YDR520C(MacIsaac)/Yeast

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TCTCCTGC---
TCTCCGGCGGA
 A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C A C G T A C G T A C G T
C A G T G A T C C A G T A G T C A G T C A C T G T A C G A G T C A C T G C A T G C G T A