Information for 13-CCCCTTCA (Motif 31)

G T A C A G T C A G T C A G T C A C G T A G C T A G T C C G T A
Reverse Opposite:
A C G T A C T G C T G A C G T A A C T G A C T G A C T G A C T G
p-value:1e-198
log p-value:-4.577e+02
Information Content per bp:1.929
Number of Target Sequences with motif324.0
Percentage of Target Sequences with motif72.81%
Number of Background Sequences with motif40.7
Percentage of Background Sequences with motif3.12%
Average Position of motif in Targets868.5 +/- 257.7bp
Average Position of motif in Background279.4 +/- 336.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.63
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSN4(MacIsaac)/Yeast

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTTCA
CCCCCTT--
 A C G T G T A C A G T C A G T C A G T C A C G T A G C T A G T C C G T A
A T G C G T A C A G T C G T A C G A T C A C G T A C G T A C G T A C G T

RGM1/MA0366.1/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CCCCTTCA
CCCCT---
 G T A C A G T C A G T C A G T C A C G T A G C T A G T C C G T A
A T G C A G T C A G T C A G T C A C G T A C G T A C G T A C G T

MSN4/MA0342.1/Jaspar

Match Rank:3
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CCCCTTCA
CCCCT---
 G T A C A G T C A G T C A G T C A C G T A G C T A G T C C G T A
G T A C A G T C A G T C A G T C A G C T A C G T A C G T A C G T

MAZ/MA1522.1/Jaspar

Match Rank:4
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CCCCTTCA-
CGCCCCTCCCC
 A C G T A C G T G T A C A G T C A G T C A G T C A C G T A G C T A G T C C G T A A C G T
A T G C A T C G A T G C T A G C T A G C T A G C C A G T T G A C T A G C A G T C A G T C

MSN4/Literature(Harbison)/Yeast

Match Rank:5
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTTCA
NCCCCTG--
 A C G T G T A C A G T C A G T C A G T C A C G T A G C T A G T C C G T A
A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T

MSN2(MacIsaac)/Yeast

Match Rank:6
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTTCA
GCCCCTT--
 A C G T G T A C A G T C A G T C A G T C A C G T A G C T A G T C C G T A
T A C G G A T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T

MSN2/MA0341.1/Jaspar

Match Rank:7
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CCCCTTCA
CCCCT---
 G T A C A G T C A G T C A G T C A C G T A G C T A G T C C G T A
A G T C A G T C A G T C A G T C A G C T A C G T A C G T A C G T

B52(RRM)/Drosophila_melanogaster-RNCMPT00134-PBM/HughesRNA

Match Rank:8
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CCCCTTCA
NCCCTCC-
 G T A C A G T C A G T C A G T C A C G T A G C T A G T C C G T A
A G T C A G T C A G T C T A G C A C G T A G T C A G T C A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTTCA
TTCCCCCTAC-
 A C G T A C G T A C G T G T A C A G T C A G T C A G T C A C G T A G C T A G T C C G T A
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T

GIS1/MA0306.1/Jaspar

Match Rank:10
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CCCCTTCA
ACCCCTAAA
 A C G T G T A C A G T C A G T C A G T C A C G T A G C T A G T C C G T A
G C T A A G T C A G T C A G T C A G T C A C G T C G T A C G T A G C T A