Information for 25-GAACAATTGT (Motif 38)

C T A G C G T A C T G A T G A C C T G A C G T A G C A T A C G T A C T G A G C T
Reverse Opposite:
T C G A T G A C C G T A C G T A G C A T A G C T A C T G A G C T C G A T G A T C
p-value:1e-129
log p-value:-2.977e+02
Information Content per bp:1.749
Number of Target Sequences with motif254.0
Percentage of Target Sequences with motif57.08%
Number of Background Sequences with motif48.8
Percentage of Background Sequences with motif3.74%
Average Position of motif in Targets176.3 +/- 178.6bp
Average Position of motif in Background380.5 +/- 396.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----GAACAATTGT
NNCNNAACAATTNT
 A C G T A C G T A C G T A C G T C T A G C G T A C T G A T G A C C T G A C G T A G C A T A C G T A C T G A G C T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GAACAATTGT------
GGAAAAATTGTTAGGAA
 A C G T C T A G C G T A C T G A T G A C C T G A C G T A G C A T A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:3
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAATTGT-
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A C T G A T G A C C T G A C G T A G C A T A C G T A C T G A G C T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0173.1_Sox21_2/Jaspar

Match Rank:4
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAATTGT--
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A C T G A T G A C C T G A C G T A G C A T A C G T A C T G A G C T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GAACAATTGT--
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T C T A G C G T A C T G A T G A C C T G A C G T A G C A T A C G T A C T G A G C T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0066.1_Sox17_1/Jaspar

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GAACAATTGT---
ATAAACAATTAAACA
 A C G T A C G T C T A G C G T A C T G A T G A C C T G A C G T A G C A T A C G T A C T G A G C T A C G T A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----GAACAATTGT--
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T C T A G C G T A C T G A T G A C C T G A C G T A G C A T A C G T A C T G A G C T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GAACAATTGT
NAACAAT---
 C T A G C G T A C T G A T G A C C T G A C G T A G C A T A C G T A C T G A G C T
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----GAACAATTGT---
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T C T A G C G T A C T G A T G A C C T G A C G T A G C A T A C G T A C T G A G C T A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

SFP1/MA0378.1/Jaspar

Match Rank:10
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GAACAATTGT------
ATTGAAAAAAATTTTCTACGG
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A C T G A T G A C C T G A C G T A G C A T A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A C T C G A T C T A G C T G A C T G A G C T A T C G A C T G A C G T A G C T A G C A T G A C T A G C T C A G T G A T C A G C T G C T A A G T C C A T G C T A G