Information for 4-AGARAKAYCMRM (Motif 5)

C G T A A C T G C G T A C T A G C G T A A C T G C G T A A G C T A G T C G T C A C T A G G T C A
Reverse Opposite:
A C G T A G T C A C G T A C T G C T G A A C G T G T A C A C G T A G T C A C G T A G T C A C G T
p-value:1e-295
log p-value:-6.811e+02
Information Content per bp:1.819
Number of Target Sequences with motif388.0
Percentage of Target Sequences with motif87.19%
Number of Background Sequences with motif19.3
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets325.9 +/- 413.9bp
Average Position of motif in Background401.7 +/- 188.6bp
Strand Bias (log2 ratio + to - strand density)8.1
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AGARAKAYCMRM--
GACAGAGATATCAGTGT
 A C G T A C G T A C G T C G T A A C T G C G T A C T A G C G T A A C T G C G T A A G C T A G T C G T C A C T A G G T C A A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

SRSF10(RRM)/Homo_sapiens-RNCMPT00089-PBM/HughesRNA

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGARAKAYCMRM
AGAGAAA-----
 C G T A A C T G C G T A C T A G C G T A A C T G C G T A A G C T A G T C G T C A C T A G G T C A
C G T A C T A G C G T A C T A G C T G A T C G A T C G A A C G T A C G T A C G T A C G T A C G T

Tb_0253(RRM)/Trypanosoma_brucei-RNCMPT00253-PBM/HughesRNA

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGARAKAYCMRM
AGAAAAA-----
 C G T A A C T G C G T A C T A G C G T A A C T G C G T A A G C T A G T C G T C A C T A G G T C A
C G T A C T A G C G T A C T G A C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T

SRSF10(RRM)/Homo_sapiens-RNCMPT00090-PBM/HughesRNA

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGARAKAYCMRM
AGAGAAA-----
 C G T A A C T G C G T A C T A G C G T A A C T G C G T A A G C T A G T C G T C A C T A G G T C A
C G T A A C T G C G T A C T A G C G T A T G C A T G C A A C G T A C G T A C G T A C G T A C G T

SRSF10(RRM)/Homo_sapiens-RNCMPT00019-PBM/HughesRNA

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGARAKAYCMRM
AGAGAAA-----
 C G T A A C T G C G T A C T A G C G T A A C T G C G T A A G C T A G T C G T C A C T A G G T C A
C G T A C T A G C G T A C T A G G T C A T G C A T G C A A C G T A C G T A C G T A C G T A C G T

AT3G10113(MYBrelated)/col-AT3G10113-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGARAKAYCMRM
WNAAATATCWWN
 C G T A A C T G C G T A C T A G C G T A A C T G C G T A A G C T A G T C G T C A C T A G G T C A
C G T A C T G A C G T A C G T A C G T A A C G T C G T A A C G T A G T C G C A T C G A T C G A T

Trl/MA0205.2/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGARAKAYCMRM
GAAAGAGAGAGA---
 A C G T A C G T A C G T C G T A A C T G C G T A C T A G C G T A A C T G C G T A A G C T A G T C G T C A C T A G G T C A
T C A G T C G A T C G A G C T A C A T G C G T A A T C G T G C A C T A G T G C A T C A G T C G A A C G T A C G T A C G T

Tb_0220(RRM)/Trypanosoma_brucei-RNCMPT00220-PBM/HughesRNA

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGARAKAYCMRM
NAGAAAG------
 A C G T C G T A A C T G C G T A C T A G C G T A A C T G C G T A A G C T A G T C G T C A C T A G G T C A
C G T A C T G A A C T G C T G A C G T A C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

SRSF10(RRM)/Homo_sapiens-RNCMPT00088-PBM/HughesRNA

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGARAKAYCMRM
AGAGAGG-----
 C G T A A C T G C G T A C T A G C G T A A C T G C G T A A G C T A G T C G T C A C T A G G T C A
G T C A C T A G C T G A C T A G C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T

Nv_0278(RRM)/Nematostella_vectensis-RNCMPT00278-PBM/HughesRNA

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGARAKAYCMRM
AGACACAN----
 C G T A A C T G C G T A C T A G C G T A A C T G C G T A A G C T A G T C G T C A C T A G G T C A
C G T A A T C G C G T A A G T C C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T