Information for 6-GGGACCGGCRCT (Motif 6)

C T A G C T A G T C A G C G T A G T A C G A T C C A T G T A C G G A T C C T G A A G T C G A C T
Reverse Opposite:
C T G A C T A G G A C T C T A G A T G C G T A C C T A G C A T G C G A T A G T C G A T C G A T C
p-value:1e-272
log p-value:-6.284e+02
Information Content per bp:1.716
Number of Target Sequences with motif360.0
Percentage of Target Sequences with motif80.90%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets642.5 +/- 271.7bp
Average Position of motif in Background397.6 +/- 392.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)2.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PCF5(TCP)/Oryza sativa/AthaMap

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGGACCGGCRCT
NNGGGACCAC----
 A C G T A C G T C T A G C T A G T C A G C G T A G T A C G A T C C A T G T A C G G A T C C T G A A G T C G A C T
C T A G A T G C A C T G A C T G A C T G T C G A A G T C G T A C T C G A A G T C A C G T A C G T A C G T A C G T

TCP5/MA1067.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGACCGGCRCT
GGGACCAC----
 C T A G C T A G T C A G C G T A G T A C G A T C C A T G T A C G G A T C C T G A A G T C G A C T
A C T G A C T G A C T G C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T

TCP24/MA1286.1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGGACCGGCRCT
GTTGGGACCACA---
 A C G T A C G T A C G T C T A G C T A G T C A G C G T A G T A C G A T C C A T G T A C G G A T C C T G A A G T C G A C T
C T A G G C A T A C G T C A T G A C T G A C T G T C G A A G T C A G T C C T G A G T A C G T C A A C G T A C G T A C G T

LEU3(MacIsaac)/Yeast

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGGACCGGCRCT
CCGGTACCGG----
 A C G T A C G T C T A G C T A G T C A G C G T A G T A C G A T C C A T G T A C G G A T C C T G A A G T C G A C T
T A G C A T G C C T A G C A T G C A G T G C T A G T A C A G T C T A C G A C T G A C G T A C G T A C G T A C G T

ARALYDRAFT_496250/MA1096.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGACCGGCRCT
GGGACCAC----
 C T A G C T A G T C A G C G T A G T A C G A T C C A T G T A C G G A T C C T G A A G T C G A C T
A C T G A C T G A C T G C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T

TCP3/MA1289.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGGACCGGCRCT
GTTGGGACCACAT--
 A C G T A C G T A C G T C T A G C T A G T C A G C G T A G T A C G A T C C A T G T A C G G A T C C T G A A G T C G A C T
C T A G G C A T A C G T A C T G A C T G A C T G G T C A A G T C A G T C C T G A A G T C G C T A C G A T A C G T A C G T

RTG3/Literature(Harbison)/Yeast

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGACCGGCRCT
GTGACC------
 C T A G C T A G T C A G C G T A G T A C G A T C C A T G T A C G G A T C C T G A A G T C G A C T
A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

LEU3/LEU3_SM/47-LEU3(Harbison)/Yeast

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGACCGGCRCT
CCGGTACCGG----
 A C G T A C G T C T A G C T A G T C A G C G T A G T A C G A T C C A T G T A C G G A T C C T G A A G T C G A C T
T A G C A T G C A C T G A C T G C G A T G C T A T G A C T G A C A T C G T A C G A C G T A C G T A C G T A C G T

ARALYDRAFT_897773/MA1054.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGACCGGCRCT
TGGGGACCAC----
 A C G T A C G T C T A G C T A G T C A G C G T A G T A C G A T C C A T G T A C G G A T C C T G A A G T C G A C T
A G C T A C T G C A T G C A T G T A C G G T C A A T G C A T G C C T G A G A T C A C G T A C G T A C G T A C G T

TCP4/MA1035.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGACCGGCRCT
GGGACCAC----
 C T A G C T A G T C A G C G T A G T A C G A T C C A T G T A C G G A T C C T G A A G T C G A C T
C A T G A C T G A C T G G T C A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T