Information for 9-CACTGAGATAGT (Motif 9)

G A T C C T G A A G T C A G C T C T A G C G T A C T A G C G T A A G C T C T G A A C T G G A C T
Reverse Opposite:
C T G A G T A C A G C T C T G A A C G T A G T C A C G T A G T C C T G A C T A G G A C T C T A G
p-value:1e-260
log p-value:-6.003e+02
Information Content per bp:1.716
Number of Target Sequences with motif344.0
Percentage of Target Sequences with motif77.30%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets588.1 +/- 182.8bp
Average Position of motif in Background539.1 +/- 150.9bp
Strand Bias (log2 ratio + to - strand density)4.1
Multiplicity (# of sites on avg that occur together)1.94
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer

Match Rank:1
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:CACTGAGATAGT---
-----AGATATTTHT
 G A T C C T G A A G T C A G C T C T A G C G T A C T A G C G T A A G C T C T G A A C T G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A G C T A G C T G C A T G C T A G C A T

PDR8/MA0354.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CACTGAGATAGT
-ACGGAGAT---
 G A T C C T G A A G T C A G C T C T A G C G T A C T A G C G T A A G C T C T G A A C T G G A C T
A C G T T C A G A G T C A C T G A C T G C G T A T A C G C G T A C G A T A C G T A C G T A C G T

CCA1/MA0972.1/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CACTGAGATAGT-
-----AGATATTT
 G A T C C T G A A G T C A G C T C T A G C G T A C T A G C G T A A G C T C T G A A C T G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C T G A C A G T G C T A A G C T G A C T G C A T

EPR1/MA1401.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CACTGAGATAGT---
---TAAGATATTTTT
 G A T C C T G A A G T C A G C T C T A G C G T A C T A G C G T A A G C T C T G A A C T G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G T A C T G A A C T G C G T A A C G T C G T A A C G T A C G T C G A T G C A T A G C T

CCA(Myb)/Arabidopsis-CCA.GFP-ChIP-Seq(GSE70533)/Homer

Match Rank:5
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CACTGAGATAGT---
-----AGATATYTTT
 G A T C C T G A A G T C A G C T C T A G C G T A C T A G C G T A A G C T C T G A A C T G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C T G C G T A A C G T G T C A A G C T A G C T G A C T G A C T C A G T

RVE1/MA1184.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CACTGAGATAGT-----
---TNAGATATTTTNNN
 G A T C C T G A A G T C A G C T C T A G C G T A C T A G C G T A A G C T C T G A A C T G G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C G T A C G T A A C T G C G T A A C G T G T C A C A G T A C G T C G A T G C A T A G C T C G A T C G A T

At4g01280(MYBrelated)/colamp-At4g01280-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CACTGAGATAGT-
-----AGATATTT
 G A T C C T G A A G T C A G C T C T A G C G T A C T A G C G T A A G C T C T G A A C T G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C G T A C G T G C A T

LHY1/MA1185.1/Jaspar

Match Rank:8
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CACTGAGATAGT---
-----AGATATTTTT
 G A T C C T G A A G T C A G C T C T A G C G T A C T A G C G T A A G C T C T G A A C T G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T G T C A A G C T C A G T G C A T G C A T A G C T

LHY1(MYBrelated)/col-LHY1-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CACTGAGATAGT-
-----AGATATTT
 G A T C C T G A A G T C A G C T C T A G C G T A C T A G C G T A A G C T C T G A A C T G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C G T A C G T C G A T

RVE1(MYBrelated)/col-RVE1-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CACTGAGATAGT-
-----AGATATTT
 G A T C C T G A A G T C A G C T C T A G C G T A C T A G C G T A A G C T C T G A A C T G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C G T A C G T C G A T