Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 445)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 1305)	% of Background Sequences with Motif
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-172	-3.974e+02	0.0000	340.0	76.40%	97.9	7.50%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e-153	-3.544e+02	0.0000	259.0	58.20%	24.6	1.89%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e-148	-3.424e+02	0.0000	331.0	74.38%	124.6	9.54%
GAGA-repeat/Arabidopsis-Promoters/Homer	CTCTCTCTCY	1e-143	-3.315e+02	0.0000	347.0	77.98%	164.0	12.56%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e-136	-3.140e+02	0.0000	331.0	74.38%	149.1	11.42%
TCP20(TCP)/col-TCP20-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e-133	-3.072e+02	0.0000	272.0	61.12%	63.5	4.86%
At1g72010(TCP)/colamp-At1g72010-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e-129	-2.993e+02	0.0000	288.0	64.72%	90.9	6.96%
EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer	NABTCCCWDGGGAVH	1e-129	-2.985e+02	0.0000	315.0	70.79%	135.0	10.34%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-127	-2.941e+02	0.0000	341.0	76.63%	189.9	14.54%
PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer	VNAGGKCAAAGGTCA	1e-123	-2.847e+02	0.0000	314.0	70.56%	145.6	11.15%
MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer	DGCACACGTG	1e-121	-2.798e+02	0.0000	346.0	77.75%	216.3	16.56%
SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer	GCAACAGGTG	1e-118	-2.721e+02	0.0000	269.0	60.45%	84.3	6.46%
At5g08330(TCP)/col-At5g08330-DAP-Seq(GSE60143)/Homer	GGRCCCAC	1e-118	-2.721e+02	0.0000	294.0	66.07%	122.5	9.38%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e-117	-2.698e+02	0.0000	272.0	61.12%	90.6	6.94%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e-115	-2.655e+02	0.0000	302.0	67.87%	142.4	10.91%
Unknown2/Drosophila-Promoters/Homer	CATCMCTA	1e-114	-2.633e+02	0.0000	338.0	75.96%	217.1	16.62%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-113	-2.622e+02	0.0000	256.0	57.53%	74.0	5.67%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e-112	-2.591e+02	0.0000	338.0	75.96%	222.0	17.00%
MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer	TTCAAAWTAAAAGTC	1e-111	-2.579e+02	0.0000	252.0	56.63%	72.3	5.54%
Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer	TRCACCTGCY	1e-109	-2.523e+02	0.0000	304.0	68.31%	159.2	12.19%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-109	-2.522e+02	0.0000	347.0	77.98%	252.6	19.35%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e-108	-2.505e+02	0.0000	218.0	48.99%	38.8	2.97%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e-107	-2.470e+02	0.0000	332.0	74.61%	223.4	17.11%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-103	-2.386e+02	0.0000	213.0	47.87%	40.0	3.07%
BIM2(bHLH)/col-BIM2-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNN	1e-103	-2.376e+02	0.0000	320.0	71.91%	208.9	16.00%
BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer	GARGAGAGAGAA	1e-102	-2.364e+02	0.0000	247.0	55.51%	82.7	6.34%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e-100	-2.324e+02	0.0000	327.0	73.48%	230.1	17.62%
ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer	GNMCAGGTGTGC	1e-100	-2.324e+02	0.0000	308.0	69.21%	189.1	14.49%
RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e-100	-2.314e+02	0.0000	180.0	40.45%	15.1	1.16%
TCP16(TCP)/colamp-TCP16-DAP-Seq(GSE60143)/Homer	GTGGDCCYNNNNNNN	1e-100	-2.310e+02	0.0000	273.0	61.35%	126.2	9.67%
TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer	CYRCATTCCA	1e-100	-2.309e+02	0.0000	319.0	71.69%	214.7	16.45%
HDG7(HB)/col-HDG7-DAP-Seq(GSE60143)/Homer	WGCATTTAATGC	1e-96	-2.231e+02	0.0000	214.0	48.09%	51.2	3.92%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e-93	-2.158e+02	0.0000	382.0	85.84%	407.7	31.22%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-92	-2.136e+02	0.0000	307.0	68.99%	210.8	16.15%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e-92	-2.130e+02	0.0000	318.0	71.46%	235.4	18.03%
CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer	AAATTSAATTTN	1e-92	-2.130e+02	0.0000	276.0	62.02%	150.1	11.50%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-90	-2.089e+02	0.0000	274.0	61.57%	151.0	11.57%
Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer	SSRGCAGCTGCH	1e-90	-2.075e+02	0.0000	285.0	64.04%	173.9	13.32%
Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer	CHCAGCRGGRGG	1e-86	-1.981e+02	0.0000	202.0	45.39%	55.0	4.21%
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer	NRBCARRGGTCA	1e-84	-1.938e+02	0.0000	315.0	70.79%	255.0	19.53%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e-84	-1.936e+02	0.0000	354.0	79.55%	357.2	27.36%
TF3A(C2H2)/col-TF3A-DAP-Seq(GSE60143)/Homer	NNDDGAGGAGGWNNN	1e-83	-1.924e+02	0.0000	276.0	62.02%	174.9	13.40%
At1g69690(TCP)/colamp-At1g69690-DAP-Seq(GSE60143)/Homer	NHGTGGGGCCCACHW	1e-82	-1.898e+02	0.0000	183.0	41.12%	40.9	3.14%
COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer	GKBCARAGGTCA	1e-82	-1.893e+02	0.0000	327.0	73.48%	291.8	22.35%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e-81	-1.871e+02	0.0000	330.0	74.16%	302.6	23.17%
HDG1(Homeobox)/col100-HDG1-DAP-Seq(GSE60143)/Homer	DDYAATTAATGH	1e-81	-1.867e+02	0.0000	253.0	56.85%	139.1	10.65%
GAGA-repeat/SacCer-Promoters/Homer	CTYTCTYTCTCTCTC	1e-79	-1.821e+02	0.0000	416.0	93.48%	606.2	46.43%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-78	-1.799e+02	0.0000	367.0	82.47%	421.7	32.29%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-76	-1.764e+02	0.0000	354.0	79.55%	387.3	29.66%
Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer	ACTTCCKGKT	1e-76	-1.762e+02	0.0000	275.0	61.80%	193.6	14.82%
TBP3(MYBrelated)/col-TBP3-DAP-Seq(GSE60143)/Homer	VYTAGGGCAN	1e-76	-1.761e+02	0.0000	313.0	70.34%	277.4	21.24%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e-75	-1.748e+02	0.0000	383.0	86.07%	485.8	37.21%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e-75	-1.729e+02	0.0000	319.0	71.69%	297.7	22.80%
GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer	CTCCCTGGGAGGCCN	1e-74	-1.718e+02	0.0000	268.0	60.22%	185.3	14.19%
PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer	BCACGTGVDN	1e-74	-1.711e+02	0.0000	275.0	61.80%	200.3	15.34%
TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer	TRCATTCCAG	1e-73	-1.684e+02	0.0000	305.0	68.54%	270.8	20.74%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e-70	-1.634e+02	0.0000	333.0	74.83%	350.4	26.83%
AT5G47660(Trihelix)/colamp-AT5G47660-DAP-Seq(GSE60143)/Homer	AWTTTTACCG	1e-70	-1.613e+02	0.0000	352.0	79.10%	409.5	31.36%
GATA15(C2C2gata)/col-GATA15-DAP-Seq(GSE60143)/Homer	KATGATCA	1e-69	-1.600e+02	0.0000	376.0	84.49%	490.3	37.55%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-68	-1.573e+02	0.0000	249.0	55.96%	168.3	12.89%
Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer	RGAGAGAG	1e-68	-1.566e+02	0.0000	367.0	82.47%	466.6	35.74%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-66	-1.522e+02	0.0000	282.0	63.37%	243.3	18.63%
Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer	HAWGRGGCCM	1e-65	-1.518e+02	0.0000	367.0	82.47%	476.3	36.48%
NGA4(ABI3VP1)/col-NGA4-DAP-Seq(GSE60143)/Homer	TKNTCAGGTG	1e-64	-1.482e+02	0.0000	363.0	81.57%	470.4	36.02%
AT3G25990(Trihelix)/colamp-AT3G25990-DAP-Seq(GSE60143)/Homer	TTAACCATAG	1e-64	-1.476e+02	0.0000	284.0	63.82%	255.9	19.59%
WRKY3(WRKY)/col-WRKY3-DAP-Seq(GSE60143)/Homer	NCKTTGACYDDN	1e-63	-1.464e+02	0.0000	251.0	56.40%	187.8	14.38%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e-62	-1.450e+02	0.0000	319.0	71.69%	346.6	26.54%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-62	-1.444e+02	0.0000	319.0	71.69%	348.0	26.65%
GTL1(Trihelix)/colamp-GTL1-DAP-Seq(GSE60143)/Homer	WWTTTACCKY	1e-62	-1.441e+02	0.0000	321.0	72.13%	353.4	27.06%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e-62	-1.431e+02	0.0000	246.0	55.28%	182.8	14.00%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e-61	-1.420e+02	0.0000	275.0	61.80%	244.7	18.74%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-61	-1.405e+02	0.0000	176.0	39.55%	71.8	5.50%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-61	-1.405e+02	0.0000	243.0	54.61%	180.0	13.79%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-60	-1.400e+02	0.0000	321.0	72.13%	361.2	27.66%
WIP5(C2H2)/colamp-WIP5-DAP-Seq(GSE60143)/Homer	TDTTCTCMAGGT	1e-59	-1.381e+02	0.0000	284.0	63.82%	272.0	20.83%
AT5G25475(ABI3VP1)/col-AT5G25475-DAP-Seq(GSE60143)/Homer	RNNRNCAAGCADNDB	1e-59	-1.363e+02	0.0000	280.0	62.92%	265.1	20.30%
AT5G63260(C3H)/col-AT5G63260-DAP-Seq(GSE60143)/Homer	RAAAAAGTRA	1e-58	-1.356e+02	0.0000	375.0	84.27%	539.3	41.30%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-58	-1.338e+02	0.0000	241.0	54.16%	186.0	14.25%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-57	-1.323e+02	0.0000	231.0	51.91%	169.6	12.99%
bcd(Homeobox)/Embryo-Bcd-ChIP-Seq(GSE86966)/Homer	VNNGGATTADNN	1e-57	-1.315e+02	0.0000	336.0	75.51%	421.3	32.27%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e-56	-1.307e+02	0.0000	392.0	88.09%	615.1	47.10%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e-56	-1.292e+02	0.0000	143.0	32.13%	41.2	3.15%
HuR(?)/HEK293-HuR-CLIP-Seq(GSE87887)/Homer	BTTTGGTTTG	1e-55	-1.280e+02	0.0000	397.0	89.21%	642.5	49.20%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-55	-1.275e+02	0.0000	206.0	46.29%	131.6	10.08%
PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer	NNBCACGTGN	1e-55	-1.267e+02	0.0000	261.0	58.65%	239.1	18.31%
AT2G40260(G2like)/colamp-AT2G40260-DAP-Seq(GSE60143)/Homer	WAAAYATTCTTT	1e-54	-1.259e+02	0.0000	332.0	74.61%	421.8	32.30%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e-52	-1.217e+02	0.0000	251.0	56.40%	226.2	17.32%
AT1G72740(MYBrelated)/colamp-AT1G72740-DAP-Seq(GSE60143)/Homer	NNWWAMCCTAAHWNN	1e-52	-1.209e+02	0.0000	309.0	69.44%	367.9	28.17%
PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer	KTGTTTGC	1e-52	-1.207e+02	0.0000	378.0	84.94%	585.8	44.86%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e-52	-1.206e+02	0.0000	152.0	34.16%	59.7	4.57%
ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer	AWTGATAAGA	1e-51	-1.191e+02	0.0000	208.0	46.74%	146.2	11.19%
GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer	CCGACAYYTYACGGG	1e-51	-1.188e+02	0.0000	113.0	25.39%	19.9	1.52%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-51	-1.180e+02	0.0000	235.0	52.81%	199.2	15.25%
PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer	HAATAAAGNN	1e-51	-1.178e+02	0.0000	321.0	72.13%	407.2	31.18%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e-51	-1.177e+02	0.0000	214.0	48.09%	159.0	12.18%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-50	-1.165e+02	0.0000	283.0	63.60%	309.1	23.67%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e-50	-1.165e+02	0.0000	283.0	63.60%	309.7	23.72%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e-49	-1.149e+02	0.0000	118.0	26.52%	26.4	2.02%
ARF2(ARF)/col-ARF2-DAP-Seq(GSE60143)/Homer	TTGTCGGMWN	1e-49	-1.138e+02	0.0000	372.0	83.60%	580.8	44.47%
Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer	TATTGAYY	1e-49	-1.132e+02	0.0000	304.0	68.31%	370.0	28.34%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e-48	-1.124e+02	0.0000	295.0	66.29%	348.2	26.67%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e-48	-1.119e+02	0.0000	197.0	44.27%	137.6	10.54%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e-48	-1.118e+02	0.0000	308.0	69.21%	384.0	29.41%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e-48	-1.117e+02	0.0000	158.0	35.51%	76.5	5.86%
CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer	TATCGATNAN	1e-47	-1.105e+02	0.0000	295.0	66.29%	352.7	27.01%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e-46	-1.060e+02	0.0000	320.0	71.91%	431.6	33.05%
At5g62940(C2C2dof)/col-At5g62940-DAP-Seq(GSE60143)/Homer	WHWHHACTTTTT	1e-45	-1.050e+02	0.0000	401.0	90.11%	718.1	54.99%
Initiator/Drosophila-Promoters/Homer	NTCAGTYG	1e-44	-1.022e+02	0.0000	340.0	76.40%	501.4	38.40%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-44	-1.016e+02	0.0000	336.0	75.51%	490.1	37.54%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e-43	-9.958e+01	0.0000	92.0	20.67%	13.5	1.03%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-43	-9.930e+01	0.0000	233.0	52.36%	228.1	17.47%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e-42	-9.888e+01	0.0000	101.0	22.70%	21.7	1.66%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-42	-9.835e+01	0.0000	367.0	82.47%	602.9	46.17%
AT5G02460(C2C2dof)/col-AT5G02460-DAP-Seq(GSE60143)/Homer	CHCCTTTT	1e-42	-9.823e+01	0.0000	330.0	74.16%	480.3	36.79%
SeqBias: CA-repeat	CACACACACA	1e-42	-9.679e+01	0.0000	396.0	88.99%	719.9	55.13%
SeqBias: GA-repeat	GAGAGAGAGA	1e-41	-9.615e+01	0.0000	429.0	96.40%	884.8	67.76%
Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer	BCCWTTGTBYKV	1e-40	-9.343e+01	0.0000	289.0	64.94%	376.0	28.79%
ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer	GTGACCTTGRVN	1e-40	-9.327e+01	0.0000	199.0	44.72%	170.2	13.03%
dof24(C2C2dof)/col-dof24-DAP-Seq(GSE60143)/Homer	TWMCTTTTTG	1e-40	-9.277e+01	0.0000	328.0	73.71%	488.8	37.43%
AT3G10030(Trihelix)/colamp-AT3G10030-DAP-Seq(GSE60143)/Homer	GCCGTTAA	1e-39	-9.115e+01	0.0000	294.0	66.07%	394.0	30.18%
MYB105(MYB)/colamp-MYB105-DAP-Seq(GSE60143)/Homer	RATWCCGTTA	1e-39	-9.057e+01	0.0000	283.0	63.60%	366.4	28.06%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-38	-8.935e+01	0.0000	229.0	51.46%	239.9	18.37%
OBP3(C2C2dof)/col-OBP3-DAP-Seq(GSE60143)/Homer	NYWACTTTTT	1e-38	-8.914e+01	0.0000	380.0	85.39%	676.4	51.80%
CDF3(C2C2dof)/colamp-CDF3-DAP-Seq(GSE60143)/Homer	AAAAGTRM	1e-38	-8.807e+01	0.0000	308.0	69.21%	441.3	33.80%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-38	-8.795e+01	0.0000	234.0	52.58%	253.1	19.38%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e-38	-8.757e+01	0.0000	284.0	63.82%	376.6	28.84%
TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer	AGATAAGANN	1e-37	-8.711e+01	0.0000	350.0	78.65%	574.1	43.96%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-37	-8.711e+01	0.0000	242.0	54.38%	273.9	20.98%
bZIP18(bZIP)/colamp-bZIP18-DAP-Seq(GSE60143)/Homer	KGMCAGCTND	1e-36	-8.402e+01	0.0000	397.0	89.21%	760.5	58.24%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e-36	-8.293e+01	0.0000	254.0	57.08%	311.2	23.83%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-35	-8.137e+01	0.0000	90.0	20.22%	23.8	1.82%
REF6(Zf)/Arabidopsis-REF6-ChIP-Seq(GSE106942)/Homer	TVCTCTGTTT	1e-35	-8.073e+01	0.0000	141.0	31.69%	90.0	6.89%
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer	RGCAATNAAA	1e-34	-8.019e+01	0.0000	359.0	80.67%	625.8	47.92%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e-34	-7.952e+01	0.0000	145.0	32.58%	97.4	7.46%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e-34	-7.884e+01	0.0000	169.0	37.98%	140.0	10.72%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-33	-7.797e+01	0.0000	218.0	48.99%	239.8	18.37%
MYB73(MYB)/col-MYB73-DAP-Seq(GSE60143)/Homer	NNNNHAACNGHHDHN	1e-33	-7.779e+01	0.0000	347.0	77.98%	591.3	45.28%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-33	-7.679e+01	0.0000	332.0	74.61%	545.4	41.76%
MYB33(MYB)/col-MYB33-DAP-Seq(GSE60143)/Homer	DDTYNGTTAN	1e-32	-7.461e+01	0.0000	329.0	73.93%	542.5	41.54%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-32	-7.418e+01	0.0000	224.0	50.34%	261.5	20.02%
EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer	ATTTAATGGG	1e-32	-7.414e+01	0.0000	289.0	64.94%	425.6	32.59%
MYB101(MYB)/colamp-MYB101-DAP-Seq(GSE60143)/Homer	TAACNRMY	1e-31	-7.350e+01	0.0000	344.0	77.30%	594.3	45.51%
Adof1(C2C2dof)/col-Adof1-DAP-Seq(GSE60143)/Homer	NRWAAAGYDV	1e-31	-7.334e+01	0.0000	353.0	79.33%	625.8	47.93%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-31	-7.252e+01	0.0000	121.0	27.19%	70.2	5.38%
AT3G12130(C3H)/colamp-AT3G12130-DAP-Seq(GSE60143)/Homer	TMACTTTTTV	1e-31	-7.138e+01	0.0000	335.0	75.28%	571.6	43.78%
LBD18(LOBAS2)/colamp-LBD18-DAP-Seq(GSE60143)/Homer	CKGAWWTTCHGS	1e-30	-7.049e+01	0.0000	361.0	81.12%	662.2	50.71%
COG1(C2C2dof)/col-COG1-DAP-Seq(GSE60143)/Homer	DAAAAAGTGA	1e-30	-6.909e+01	0.0000	266.0	59.78%	377.1	28.88%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e-29	-6.837e+01	0.0000	188.0	42.25%	196.4	15.04%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-29	-6.832e+01	0.0000	186.0	41.80%	192.0	14.70%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-29	-6.796e+01	0.0000	244.0	54.83%	324.6	24.86%
SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer	WNBCACGTGA	1e-29	-6.721e+01	0.0000	244.0	54.83%	326.3	24.98%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e-29	-6.700e+01	0.0000	258.0	57.98%	362.1	27.73%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e-28	-6.663e+01	0.0000	136.0	30.56%	102.2	7.83%
AT2G28810(C2C2dof)/colamp-AT2G28810-DAP-Seq(GSE60143)/Homer	VAAAAAGTWA	1e-28	-6.639e+01	0.0000	318.0	71.46%	533.3	40.84%
At2g01060(G2like)/colamp-At2g01060-DAP-Seq(GSE60143)/Homer	AGATKCBNWW	1e-28	-6.612e+01	0.0000	379.0	85.17%	743.2	56.91%
REB1/SacCer-Promoters/Homer	KCCGGGTAAYRR	1e-28	-6.594e+01	0.0000	128.0	28.76%	90.5	6.93%
TCP1(TCP)/col-TCP1-DAP-Seq(GSE60143)/Homer	GGGGGCCCMMCN	1e-27	-6.239e+01	0.0000	102.0	22.92%	56.3	4.31%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-26	-6.120e+01	0.0000	163.0	36.63%	161.2	12.35%
caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer	GGYCATAAAW	1e-26	-6.113e+01	0.0000	210.0	47.19%	261.2	20.01%
SeqBias: TA-repeat	TATATATATA	1e-26	-6.112e+01	0.0000	325.0	73.03%	572.6	43.85%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e-26	-6.034e+01	0.0000	193.0	43.37%	225.9	17.30%
At3g24120(G2like)/col-At3g24120-DAP-Seq(GSE60143)/Homer	NWWAGMATMW	1e-26	-6.007e+01	0.0000	376.0	84.49%	752.0	57.59%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e-26	-6.001e+01	0.0000	180.0	40.45%	198.2	15.18%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e-26	-5.988e+01	0.0000	346.0	77.75%	645.1	49.40%
At3g11280(MYBrelated)/col-At3g11280-DAP-Seq(GSE60143)/Homer	GATAAGRT	1e-25	-5.909e+01	0.0000	248.0	55.73%	359.7	27.55%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e-24	-5.618e+01	0.0000	168.0	37.75%	182.5	13.98%
HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer	RACAGCTGTTBH	1e-23	-5.522e+01	0.0000	160.0	35.96%	168.4	12.90%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-23	-5.464e+01	0.0000	173.0	38.88%	196.6	15.05%
At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer	WTTYTACT	1e-23	-5.451e+01	0.0000	404.0	90.79%	886.6	67.90%
At5g05790(MYBrelated)/col-At5g05790-DAP-Seq(GSE60143)/Homer	AYCTTATC	1e-23	-5.450e+01	0.0000	248.0	55.73%	373.9	28.64%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-23	-5.385e+01	0.0000	221.0	49.66%	307.5	23.55%
PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer	YCCDNTCCAGGTTTT	1e-23	-5.356e+01	0.0000	176.0	39.55%	205.2	15.71%
At3g04030(G2like)/col-At3g04030-DAP-Seq(GSE60143)/Homer	DRGAATCT	1e-23	-5.322e+01	0.0000	219.0	49.21%	304.5	23.32%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-22	-5.175e+01	0.0000	172.0	38.65%	201.0	15.40%
ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer	ACCGGAAGTG	1e-22	-5.158e+01	0.0000	217.0	48.76%	304.8	23.35%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-22	-5.125e+01	0.0000	249.0	55.96%	386.5	29.60%
AT5G60130(ABI3VP1)/col-AT5G60130-DAP-Seq(GSE60143)/Homer	WTTYTAAGVAAA	1e-22	-5.111e+01	0.0000	240.0	53.93%	363.2	27.82%
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer	TTTTATGGCM	1e-22	-5.087e+01	0.0000	325.0	73.03%	608.2	46.58%
AT2G33550(Trihelix)/colamp-AT2G33550-DAP-Seq(GSE60143)/Homer	TTTAAGGGCAYTTTT	1e-21	-5.053e+01	0.0000	294.0	66.07%	514.2	39.38%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-21	-5.020e+01	0.0000	316.0	71.01%	582.1	44.58%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e-21	-4.996e+01	0.0000	112.0	25.17%	90.2	6.91%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-21	-4.989e+01	0.0000	331.0	74.38%	631.4	48.36%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e-21	-4.970e+01	0.0000	186.0	41.80%	237.6	18.19%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e-21	-4.928e+01	0.0000	176.0	39.55%	216.3	16.56%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-21	-4.922e+01	0.0000	229.0	51.46%	341.9	26.18%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-21	-4.875e+01	0.0000	220.0	49.44%	320.4	24.54%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-21	-4.871e+01	0.0000	311.0	69.89%	572.0	43.81%
TCP7(TCP)/col-TCP7-DAP-Seq(GSE60143)/Homer	GTGGGSCCCACHHNN	1e-21	-4.862e+01	0.0000	117.0	26.29%	101.4	7.77%
SUT1?/SacCer-Promoters/Homer	CCCCGCGC	1e-21	-4.846e+01	0.0000	398.0	89.44%	882.6	67.59%
WRKY40(WRKY)/colamp-WRKY40-DAP-Seq(GSE60143)/Homer	AHWAGTCAAC	1e-20	-4.825e+01	0.0000	150.0	33.71%	164.9	12.63%
WRKY8(WRKY)/colamp-WRKY8-DAP-Seq(GSE60143)/Homer	CGTTGACTTT	1e-20	-4.709e+01	0.0000	64.0	14.38%	25.9	1.99%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e-20	-4.655e+01	0.0000	117.0	26.29%	105.4	8.07%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-20	-4.617e+01	0.0000	241.0	54.16%	382.6	29.30%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e-19	-4.582e+01	0.0000	152.0	34.16%	174.8	13.39%
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer	HDGYAATGAAAN	1e-19	-4.575e+01	0.0000	258.0	57.98%	429.9	32.92%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e-19	-4.571e+01	0.0000	371.0	83.37%	786.4	60.22%
WRKY21(WRKY)/colamp-WRKY21-DAP-Seq(GSE60143)/Homer	DCGTTGACTTTT	1e-19	-4.543e+01	0.0000	59.0	13.26%	21.1	1.62%
SPL1(SBP)/colamp-SPL1-DAP-Seq(GSE60143)/Homer	HYGTACDTWH	1e-19	-4.540e+01	0.0000	330.0	74.16%	645.1	49.40%
AT4G37180(G2like)/col-AT4G37180-DAP-Seq(GSE60143)/Homer	AGAATCTTNN	1e-19	-4.503e+01	0.0000	220.0	49.44%	332.9	25.50%
SRS7(SRS)/colamp-SRS7-DAP-Seq(GSE60143)/Homer	HATAGGTTTH	1e-19	-4.469e+01	0.0000	360.0	80.90%	750.7	57.49%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-19	-4.451e+01	0.0000	99.0	22.25%	79.0	6.05%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-19	-4.434e+01	0.0000	320.0	71.91%	617.3	47.27%
AT1G47655(C2C2dof)/colamp-AT1G47655-DAP-Seq(GSE60143)/Homer	YHACTTTTTS	1e-19	-4.378e+01	0.0000	357.0	80.22%	743.5	56.94%
WRKY31(WRKY)/colamp-WRKY31-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWK	1e-18	-4.375e+01	0.0000	170.0	38.20%	218.8	16.76%
IDD5(C2H2)/colamp-IDD5-DAP-Seq(GSE60143)/Homer	TTTTGTCTTTTTBTK	1e-18	-4.343e+01	0.0000	109.0	24.49%	97.0	7.43%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e-18	-4.331e+01	0.0000	45.0	10.11%	9.5	0.72%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e-18	-4.318e+01	0.0000	195.0	43.82%	277.7	21.27%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-18	-4.286e+01	0.0000	277.0	62.25%	494.0	37.83%
At1g25550(G2like)/colamp-At1g25550-DAP-Seq(GSE60143)/Homer	NAGATTCY	1e-18	-4.279e+01	0.0000	215.0	48.31%	327.6	25.08%
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer	CYHATAAAAN	1e-18	-4.190e+01	0.0000	315.0	70.79%	611.5	46.83%
AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer	TTWHGGTGCACC	1e-17	-4.136e+01	0.0000	276.0	62.02%	496.9	38.05%
AT5G45580(G2like)/colamp-AT5G45580-DAP-Seq(GSE60143)/Homer	ADRGAATCTH	1e-17	-3.990e+01	0.0000	262.0	58.88%	462.0	35.38%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e-17	-3.984e+01	0.0000	145.0	32.58%	175.2	13.42%
SeqBias: CG bias	SSSSSSSSSS	1e-17	-3.978e+01	0.0000	411.0	92.36%	972.7	74.49%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-17	-3.961e+01	0.0000	289.0	64.94%	541.1	41.43%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-17	-3.919e+01	0.0000	154.0	34.61%	196.1	15.02%
MYB77(MYB)/col-MYB77-DAP-Seq(GSE60143)/Homer	NYAACBGYMC	1e-16	-3.893e+01	0.0000	284.0	63.82%	529.5	40.55%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e-16	-3.877e+01	0.0000	107.0	24.04%	103.7	7.94%
STZ(C2H2)/colamp-STZ-DAP-Seq(GSE60143)/Homer	HNBTCACT	1e-16	-3.820e+01	0.0000	383.0	86.07%	862.9	66.08%
ATY13(MYB)/col-ATY13-DAP-Seq(GSE60143)/Homer	YYYAACYRHH	1e-16	-3.794e+01	0.0000	343.0	77.08%	719.1	55.07%
AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer	DKSWCACT	1e-15	-3.673e+01	0.0000	371.0	83.37%	823.4	63.05%
At5g58900(MYBrelated)/colamp-At5g58900-DAP-Seq(GSE60143)/Homer	WWWTYTTATCTWWWW	1e-15	-3.591e+01	0.0000	253.0	56.85%	453.1	34.70%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e-15	-3.567e+01	0.0000	119.0	26.74%	133.4	10.22%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-15	-3.544e+01	0.0000	348.0	78.20%	747.3	57.23%
MYB65(MYB)/colamp-MYB65-DAP-Seq(GSE60143)/Homer	RACNGTTA	1e-15	-3.509e+01	0.0000	260.0	58.43%	476.5	36.49%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e-14	-3.423e+01	0.0000	128.0	28.76%	155.2	11.89%
WRKY6(WRKY)/colamp-WRKY6-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWD	1e-14	-3.327e+01	0.0000	176.0	39.55%	265.8	20.35%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-14	-3.304e+01	0.0000	110.0	24.72%	122.4	9.38%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e-14	-3.243e+01	0.0000	79.0	17.75%	67.9	5.20%
WRKY27(WRKY)/colamp-WRKY27-DAP-Seq(GSE60143)/Homer	NHGTTGACYTWD	1e-14	-3.239e+01	0.0000	173.0	38.88%	261.9	20.06%
RAP211(AP2EREBP)/colamp-RAP211-DAP-Seq(GSE60143)/Homer	RGCCGGCYWW	1e-13	-3.185e+01	0.0000	255.0	57.30%	476.0	36.45%
DREB2(AP2EREBP)/col-DREB2-DAP-Seq(GSE60143)/Homer	TMACCGACATWA	1e-13	-3.140e+01	0.0000	145.0	32.58%	200.8	15.38%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e-13	-3.089e+01	0.0000	73.0	16.40%	60.4	4.62%
LBD19(LOBAS2)/colamp-LBD19-DAP-Seq(GSE60143)/Homer	CCKGAAWTTCMGGAW	1e-13	-3.026e+01	0.0000	271.0	60.90%	529.5	40.55%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e-13	-3.023e+01	0.0000	47.0	10.56%	23.5	1.80%
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer	VGCCATAAAA	1e-13	-3.011e+01	0.0000	306.0	68.76%	635.6	48.68%
Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer	DAGGTGTBAA	1e-13	-2.994e+01	0.0000	180.0	40.45%	287.7	22.04%
CELF2(RRM)/JSL1-CELF2-CLIP-Seq(GSE71264)/Homer	RGTGTCAG	1e-12	-2.958e+01	0.0000	78.0	17.53%	71.9	5.50%
AtGRF6(GRF)/col-AtGRF6-DAP-Seq(GSE60143)/Homer	NTGTCAGADNNNNNN	1e-12	-2.872e+01	0.0000	200.0	44.94%	342.2	26.21%
WRKY75(WRKY)/col-WRKY75-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e-12	-2.869e+01	0.0000	178.0	40.00%	287.8	22.04%
SeqBias: A/T bias	WWWWWWWWWW	1e-12	-2.864e+01	0.0000	436.0	97.98%	1142.1	87.46%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-12	-2.836e+01	0.0000	151.0	33.93%	224.1	17.16%
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer	TTGAMCTTTG	1e-12	-2.827e+01	0.0000	258.0	57.98%	501.7	38.42%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e-12	-2.818e+01	0.0000	102.0	22.92%	119.9	9.18%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-11	-2.759e+01	0.0000	128.0	28.76%	175.2	13.42%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-11	-2.750e+01	0.0000	162.0	36.40%	253.2	19.39%
OBP1(C2C2dof)/col-OBP1-DAP-Seq(GSE60143)/Homer	NHHACTTTWT	1e-11	-2.733e+01	0.0000	308.0	69.21%	655.8	50.22%
Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer	MCAGCTGBYH	1e-11	-2.683e+01	0.0000	185.0	41.57%	312.8	23.95%
WRKY20(WRKY)/col-WRKY20-DAP-Seq(GSE60143)/Homer	CKTTGACYWD	1e-11	-2.682e+01	0.0000	152.0	34.16%	232.1	17.77%
At3g12730(G2like)/colamp-At3g12730-DAP-Seq(GSE60143)/Homer	AAGATTCT	1e-11	-2.678e+01	0.0000	238.0	53.48%	452.6	34.66%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-11	-2.674e+01	0.0000	167.0	37.53%	268.3	20.54%
GATA20(C2C2gata)/colamp-GATA20-DAP-Seq(GSE60143)/Homer	TNGATCNDNM	1e-11	-2.658e+01	0.0000	300.0	67.42%	634.2	48.57%
GATA4(C2C2gata)/col-GATA4-DAP-Seq(GSE60143)/Homer	DDWTYAGATCTR	1e-11	-2.632e+01	0.0000	170.0	38.20%	277.6	21.26%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-11	-2.627e+01	0.0000	40.0	8.99%	19.6	1.50%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-11	-2.627e+01	0.0000	40.0	8.99%	19.6	1.50%
At5g08520(MYBrelated)/colamp-At5g08520-DAP-Seq(GSE60143)/Homer	ADBSTTATCY	1e-11	-2.593e+01	0.0000	220.0	49.44%	407.2	31.18%
WRKY55(WRKY)/col-WRKY55-DAP-Seq(GSE60143)/Homer	NCGTTGACTT	1e-11	-2.592e+01	0.0000	189.0	42.47%	326.7	25.02%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e-10	-2.440e+01	0.0000	172.0	38.65%	290.9	22.28%
WRKY15(WRKY)/col-WRKY15-DAP-Seq(GSE60143)/Homer	VGTTGACTWW	1e-10	-2.439e+01	0.0000	178.0	40.00%	305.6	23.40%
TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer	SMCATCTGKH	1e-10	-2.403e+01	0.0000	162.0	36.40%	267.3	20.47%
Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer	AGGTGTGAAA	1e-10	-2.316e+01	0.0000	158.0	35.51%	261.4	20.02%
PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer	RTGATTKATRGN	1e-9	-2.290e+01	0.0000	184.0	41.35%	327.1	25.05%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e-9	-2.266e+01	0.0000	130.0	29.21%	197.5	15.12%
AT1G49560(G2like)/colamp-AT1G49560-DAP-Seq(GSE60143)/Homer	GAWTCTNWDA	1e-9	-2.227e+01	0.0000	217.0	48.76%	417.3	31.96%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e-9	-2.223e+01	0.0000	124.0	27.87%	185.2	14.18%
At5g04390(C2H2)/col200-At5g04390-DAP-Seq(GSE60143)/Homer	AGTGANDN	1e-9	-2.156e+01	0.0000	365.0	82.02%	875.7	67.06%
GT2(Trihelix)/colamp-GT2-DAP-Seq(GSE60143)/Homer	AMGGTAAAWWWN	1e-9	-2.078e+01	0.0000	187.0	42.02%	345.5	26.46%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e-8	-2.059e+01	0.0000	173.0	38.88%	310.6	23.79%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e-8	-2.055e+01	0.0000	77.0	17.30%	91.1	6.98%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e-8	-2.046e+01	0.0000	160.0	35.96%	278.4	21.32%
ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer	CATCATCATC	1e-8	-2.014e+01	0.0000	45.0	10.11%	35.2	2.69%
WRKY14(WRKY)/colamp-WRKY14-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTN	1e-8	-1.958e+01	0.0000	102.0	22.92%	146.5	11.22%
HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer	TGCCAGCB	1e-8	-1.943e+01	0.0000	198.0	44.49%	381.8	29.23%
EMB1789(C3H)/col-EMB1789-DAP-Seq(GSE60143)/Homer	TWTTTACCGYND	1e-8	-1.930e+01	0.0000	115.0	25.84%	176.3	13.50%
WRKY29(WRKY)/colamp-WRKY29-DAP-Seq(GSE60143)/Homer	MGTTGACTTT	1e-8	-1.924e+01	0.0000	177.0	39.78%	327.4	25.07%
WRKY28(WRKY)/col-WRKY28-DAP-Seq(GSE60143)/Homer	BGTTGACTWH	1e-8	-1.914e+01	0.0000	191.0	42.92%	364.1	27.88%
Tal1	CATCTG	1e-8	-1.914e+01	0.0000	151.0	33.93%	262.8	20.12%
MYB70(MYB)/col-MYB70-DAP-Seq(GSE60143)/Homer	WTAACNGTTA	1e-8	-1.898e+01	0.0000	255.0	57.30%	542.6	41.55%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-8	-1.892e+01	0.0000	137.0	30.79%	229.6	17.59%
WRKY45(WRKY)/col-WRKY45-DAP-Seq(GSE60143)/Homer	HNNNKTTGACTWWNH	1e-7	-1.818e+01	0.0000	89.0	20.00%	124.0	9.49%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e-7	-1.731e+01	0.0000	24.0	5.39%	10.2	0.78%
SeqBias: C/A-bias	MMMMMMMMMM	1e-7	-1.655e+01	0.0000	442.0	99.33%	1225.6	93.86%
AT2G38300(G2like)/col-AT2G38300-DAP-Seq(GSE60143)/Homer	ADRGAATGTT	1e-6	-1.570e+01	0.0000	173.0	38.88%	336.4	25.76%
At1g49010(MYBrelated)/col-At1g49010-DAP-Seq(GSE60143)/Homer	RGATAASNTT	1e-6	-1.551e+01	0.0000	256.0	57.53%	568.0	43.49%
WRKY50(WRKY)/col-WRKY50-DAP-Seq(GSE60143)/Homer	NNTTGACTWNNGNNN	1e-6	-1.538e+01	0.0000	158.0	35.51%	300.0	22.97%
SeqBias: GCW-triplet	GCWGCWGCWGCW	1e-6	-1.527e+01	0.0000	440.0	98.88%	1217.5	93.23%
Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer	NANTGCSGCA	1e-6	-1.514e+01	0.0000	112.0	25.17%	187.6	14.37%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-6	-1.461e+01	0.0000	159.0	35.73%	306.6	23.48%
WRKY25(WRKY)/colamp-WRKY25-DAP-Seq(GSE60143)/Homer	NNNNHRGTCAAMNNN	1e-6	-1.445e+01	0.0000	183.0	41.12%	370.3	28.36%
WRKY43(WRKY)/colamp-WRKY43-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTT	1e-5	-1.345e+01	0.0000	72.0	16.18%	105.0	8.04%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e-5	-1.343e+01	0.0000	52.0	11.69%	63.2	4.84%
Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer	CTTTGATGTGSB	1e-5	-1.340e+01	0.0000	55.0	12.36%	69.0	5.28%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-5	-1.338e+01	0.0000	93.0	20.90%	151.0	11.56%
LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer	ATGATTRATG	1e-5	-1.267e+01	0.0000	164.0	36.85%	331.2	25.36%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e-5	-1.259e+01	0.0000	45.0	10.11%	52.6	4.02%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e-5	-1.243e+01	0.0000	217.0	48.76%	477.2	36.55%
WRKY65(WRKY)/colamp-WRKY65-DAP-Seq(GSE60143)/Homer	AWWWAGTCAACG	1e-5	-1.240e+01	0.0000	100.0	22.47%	172.5	13.21%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-5	-1.237e+01	0.0000	182.0	40.90%	381.0	29.18%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-5	-1.211e+01	0.0000	134.0	30.11%	257.6	19.72%
RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer	TGCATGCA	1e-5	-1.197e+01	0.0000	214.0	48.09%	472.6	36.19%
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer	GGYAATGAAA	1e-5	-1.191e+01	0.0000	90.0	20.22%	151.5	11.60%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e-5	-1.186e+01	0.0000	48.0	10.79%	60.2	4.61%
ATHB24(ZFHD)/colamp-ATHB24-DAP-Seq(GSE60143)/Homer	TAATTAAS	1e-5	-1.157e+01	0.0000	154.0	34.61%	312.9	23.96%
SeqBias: polyA-repeat	AAAAAAAAAA	1e-4	-1.110e+01	0.0001	443.0	99.55%	1252.6	95.93%
Unknown5/Drosophila-Promoters/Homer	GCTGATAASV	1e-4	-1.102e+01	0.0001	127.0	28.54%	246.3	18.86%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e-4	-1.072e+01	0.0001	16.0	3.60%	8.5	0.65%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e-4	-1.070e+01	0.0001	60.0	13.48%	89.5	6.85%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e-4	-1.052e+01	0.0001	78.0	17.53%	131.0	10.03%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-4	-1.047e+01	0.0001	70.0	15.73%	112.7	8.63%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e-4	-1.033e+01	0.0001	43.0	9.66%	55.8	4.27%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-4	-1.024e+01	0.0001	103.0	23.15%	191.9	14.70%
DEL2(E2FDP)/col-DEL2-DAP-Seq(GSE60143)/Homer	WTTTCSCGCC	1e-4	-9.786e+00	0.0002	79.0	17.75%	136.5	10.45%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-4	-9.587e+00	0.0002	87.0	19.55%	156.6	11.99%
GRF9(GRF)/colamp-GRF9-DAP-Seq(GSE60143)/Homer	NWCTGACANNNNNNN	1e-4	-9.562e+00	0.0002	107.0	24.04%	205.5	15.73%
At1g64620(C2C2dof)/colamp-At1g64620-DAP-Seq(GSE60143)/Homer	CACTTTTT	1e-4	-9.310e+00	0.0003	164.0	36.85%	355.3	27.21%
CCA(Myb)/Arabidopsis-CCA.GFP-ChIP-Seq(GSE70533)/Homer	AGATATYTTT	1e-3	-8.669e+00	0.0005	140.0	31.46%	296.5	22.70%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e-3	-8.620e+00	0.0006	43.0	9.66%	61.4	4.70%
Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer	GGGAAAAMCCCG	1e-3	-8.558e+00	0.0006	32.0	7.19%	39.9	3.05%
TOD6?/SacCer-Promoters/Homer	GCGATGAGMT	1e-3	-8.521e+00	0.0006	36.0	8.09%	47.6	3.64%
SeqBias: G/A bias	RRRRRRRRRR	1e-3	-8.076e+00	0.0010	444.0	99.78%	1270.2	97.27%
WRKY22(WRKY)/colamp-WRKY22-DAP-Seq(GSE60143)/Homer	WWAAAGTCAACK	1e-3	-7.889e+00	0.0012	93.0	20.90%	181.5	13.90%
Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer	YGGCCCCGCCCC	1e-3	-7.848e+00	0.0012	106.0	23.82%	214.4	16.42%
AT1G76880(Trihelix)/col-AT1G76880-DAP-Seq(GSE60143)/Homer	ACGGTAAAAW	1e-3	-7.719e+00	0.0014	75.0	16.85%	138.5	10.61%
SPL15(SBP)/colamp-SPL15-DAP-Seq(GSE60143)/Homer	WDWMMGTACADW	1e-3	-7.590e+00	0.0016	243.0	54.61%	593.8	45.47%
WRKY18(WRKY)/col-WRKY18-DAP-Seq(GSE60143)/Homer	NNNTTGACYWNNNNN	1e-3	-7.555e+00	0.0016	199.0	44.72%	467.2	35.78%
BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer	NAMCAGCTGK	1e-3	-7.056e+00	0.0027	113.0	25.39%	238.3	18.25%
WRKY26(WRKY)/colamp-WRKY26-DAP-Seq(GSE60143)/Homer	CGTTGACTWDKN	1e-3	-7.016e+00	0.0028	85.0	19.10%	167.1	12.79%
Unknown4/Drosophila-Promoters/Homer	AAAAATACCRMA	1e-2	-6.845e+00	0.0033	22.0	4.94%	25.3	1.94%
AT5G66940(C2C2dof)/col-AT5G66940-DAP-Seq(GSE60143)/Homer	NNHACTTTWT	1e-2	-6.834e+00	0.0033	213.0	47.87%	514.6	39.41%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-2	-6.754e+00	0.0036	25.0	5.62%	31.1	2.38%
REM19(REM)/colamp-REM19-DAP-Seq(GSE60143)/Homer	AAAAAAAA	1e-2	-6.406e+00	0.0050	45.0	10.11%	75.3	5.76%
OBP4(C2C2dof)/col-OBP4-DAP-Seq(GSE60143)/Homer	WTTHACTTTTTB	1e-2	-6.375e+00	0.0052	160.0	35.96%	370.2	28.35%
dof43(C2C2dof)/colamp-dof43-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e-2	-6.202e+00	0.0061	163.0	36.63%	380.7	29.15%
ATHB23(ZFHD)/col-ATHB23-DAP-Seq(GSE60143)/Homer	HTAATTARNN	1e-2	-6.201e+00	0.0061	155.0	34.83%	358.1	27.43%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e-2	-6.150e+00	0.0064	23.0	5.17%	29.5	2.26%
AT1G76870(Trihelix)/col-AT1G76870-DAP-Seq(GSE60143)/Homer	AAAACCRGWW	1e-2	-6.036e+00	0.0072	73.0	16.40%	145.0	11.10%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e-2	-6.015e+00	0.0073	45.0	10.11%	77.1	5.90%
WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer	MCTCCCMCRCAB	1e-2	-5.881e+00	0.0083	49.0	11.01%	87.4	6.69%
VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer	TTTTTTTTTT	1e-2	-5.487e+00	0.0123	4.0	0.90%	0.9	0.07%
WRKY24(WRKY)/colamp-WRKY24-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e-2	-5.414e+00	0.0132	123.0	27.64%	279.3	21.39%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-2	-5.340e+00	0.0141	99.0	22.25%	216.1	16.55%
WRKY71(WRKY)/col-WRKY71-DAP-Seq(GSE60143)/Homer	CKTTGACYWW	1e-2	-5.179e+00	0.0166	103.0	23.15%	228.5	17.50%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-2	-5.023e+00	0.0193	15.0	3.37%	17.3	1.33%
AT3G52440(C2C2dof)/colamp-AT3G52440-DAP-Seq(GSE60143)/Homer	DTHACTTTTT	1e-2	-4.838e+00	0.0232	222.0	49.89%	563.5	43.15%
FRS9(ND)/col-FRS9-DAP-Seq(GSE60143)/Homer	RGAGAGAGAAAG	1e-2	-4.708e+00	0.0263	14.0	3.15%	16.4	1.26%
BBX31(Orphan)/col-BBX31-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e-2	-4.657e+00	0.0276	169.0	37.98%	414.2	31.72%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e-2	-4.655e+00	0.0276	18.0	4.04%	24.7	1.90%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e-2	-4.606e+00	0.0289	42.0	9.44%	78.7	6.03%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e-1	-4.535e+00	0.0309	6.0	1.35%	3.1	0.24%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e-1	-4.352e+00	0.0370	15.0	3.37%	19.5	1.49%
SeqBias: polyC-repeat	CCCCCCCCCC	1e-1	-4.283e+00	0.0396	433.0	97.30%	1236.6	94.70%
FUS3(ABI3VP1)/col-FUS3-DAP-Seq(GSE60143)/Homer	DNNWTNTGCATGKNN	1e-1	-4.249e+00	0.0408	104.0	23.37%	241.0	18.45%
PSE(SNAPc)/K562-mStart-Seq/Homer	WAVTCACCMTAASYDAAAAG	1e-1	-4.153e+00	0.0448	66.0	14.83%	141.8	10.86%
 Ik-1	NHTTGGGAATRCC	1e-1	-4.090e+00	0.0476	444.0	99.78%	1285.8	98.46%
FEA4(bZIP)/Corn-FEA4-ChIP-Seq(GSE61954)/Homer	TGACGTCACS	1e-1	-3.830e+00	0.0615	125.0	28.09%	302.8	23.19%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e-1	-3.824e+00	0.0617	37.0	8.31%	71.6	5.49%
ATHB25(ZFHD)/colamp-ATHB25-DAP-Seq(GSE60143)/Homer	TAATTAVB	1e-1	-3.701e+00	0.0696	167.0	37.53%	421.1	32.25%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e-1	-3.583e+00	0.0781	48.0	10.79%	100.9	7.73%
DEAR2(AP2EREBP)/colamp-DEAR2-DAP-Seq(GSE60143)/Homer	HCACCGACAWHD	1e-1	-3.562e+00	0.0795	167.0	37.53%	423.5	32.43%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e-1	-3.430e+00	0.0905	11.0	2.47%	14.0	1.07%
JGL(C2H2)/col-JGL-DAP-Seq(GSE60143)/Homer	ACYTTCAGTT	1e-1	-3.187e+00	0.1151	153.0	34.38%	389.9	29.86%
PTF1(TCP)/colamp-PTF1-DAP-Seq(GSE60143)/Homer	RDDGGGACCACA	1e-1	-3.154e+00	0.1186	12.0	2.70%	17.1	1.31%
MYB119(MYB)/colamp-MYB119-DAP-Seq(GSE60143)/Homer	YRACCGTTACDD	1e-1	-3.153e+00	0.1186	93.0	20.90%	223.9	17.14%
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer	NCYAATAAAA	1e-1	-3.126e+00	0.1213	178.0	40.00%	461.1	35.31%
WRKY42(WRKY)/colamp-WRKY42-DAP-Seq(GSE60143)/Homer	NAAAGTCAACGN	1e-1	-2.966e+00	0.1420	62.0	13.93%	142.3	10.90%
FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer	TGTTTAYTTAGC	1e-1	-2.961e+00	0.1423	65.0	14.61%	150.8	11.54%
RLR1?/SacCer-Promoters/Homer	WTTTTCYYTTTT	1e-1	-2.938e+00	0.1452	23.0	5.17%	43.1	3.30%
Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer	GGCMATGAAA	1e-1	-2.938e+00	0.1452	121.0	27.19%	303.7	23.26%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e-1	-2.937e+00	0.1452	3.0	0.67%	1.4	0.11%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e-1	-2.937e+00	0.1452	3.0	0.67%	1.7	0.13%
BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer	YTYTCTCTCTCTCTA	1e-1	-2.937e+00	0.1452	3.0	0.67%	1.2	0.10%
PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer	TGGTACATTCCA	1e-1	-2.919e+00	0.1460	50.0	11.24%	111.8	8.56%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-1	-2.907e+00	0.1474	303.0	68.09%	832.1	63.73%
ASHR1(ND)/col-ASHR1-DAP-Seq(GSE60143)/Homer	NTGGTGAN	1e-1	-2.876e+00	0.1515	116.0	26.07%	290.8	22.27%
KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer	ARGAATAWWN	1e-1	-2.815e+00	0.1607	172.0	38.65%	449.3	34.41%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-1	-2.615e+00	0.1958	15.0	3.37%	26.4	2.03%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e-1	-2.522e+00	0.2142	53.0	11.91%	123.3	9.45%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-1	-2.494e+00	0.2198	21.0	4.72%	41.8	3.20%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e-1	-2.493e+00	0.2198	5.0	1.12%	5.5	0.42%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e-1	-2.489e+00	0.2198	81.0	18.20%	199.2	15.25%
MYB3(MYB)/Arabidopsis-MYB3-ChIP-Seq(GSE80564)/Homer	GKTAGGTRGG	1e-1	-2.466e+00	0.2243	159.0	35.73%	418.7	32.06%
WRKY33(WRKY)/col-WRKY33-DAP-Seq(GSE60143)/Homer	CGTTGACYAW	1e-1	-2.442e+00	0.2291	105.0	23.60%	266.9	20.44%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-1	-2.424e+00	0.2325	30.0	6.74%	64.4	4.93%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-1	-2.402e+00	0.2372	78.0	17.53%	192.3	14.72%
SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer	CCAAAAAGGG	1e-1	-2.366e+00	0.2453	106.0	23.82%	270.3	20.70%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-1	-2.350e+00	0.2487	27.0	6.07%	57.6	4.41%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-2.292e+00	0.2628	194.0	43.60%	522.6	40.02%
SPL9(SBP)/colamp-SPL9-DAP-Seq(GSE60143)/Homer	BTGTACTT	1e0	-2.279e+00	0.2656	248.0	55.73%	680.5	52.11%
KAN2(G2like)/colamp-KAN2-DAP-Seq(GSE60143)/Homer	ATATTCTY	1e0	-2.270e+00	0.2672	143.0	32.13%	376.5	28.83%
LCL1(MYBrelated)/colamp-LCL1-DAP-Seq(GSE60143)/Homer	NAAAATATCTWHWWN	1e0	-2.224e+00	0.2790	17.0	3.82%	33.7	2.58%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-2.196e+00	0.2862	82.0	18.43%	206.1	15.79%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-2.133e+00	0.3041	6.0	1.35%	8.3	0.64%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-2.114e+00	0.3091	13.0	2.92%	24.9	1.91%
IDD4(C2H2)/col-IDD4-DAP-Seq(GSE60143)/Homer	TTTGTCTTTWTB	1e0	-2.042e+00	0.3313	63.0	14.16%	156.8	12.01%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-1.994e+00	0.3466	58.0	13.03%	143.4	10.98%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-1.959e+00	0.3582	28.0	6.29%	63.6	4.87%
GT3a(Trihelix)/col-GT3a-DAP-Seq(GSE60143)/Homer	WNACACGTGTYWWAW	1e0	-1.806e+00	0.4165	24.0	5.39%	54.8	4.20%
At1g75490(AP2EREBP)/colamp-At1g75490-DAP-Seq(GSE60143)/Homer	CACCGMCT	1e0	-1.656e+00	0.4827	219.0	49.21%	609.7	46.69%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-1.608e+00	0.5048	6.0	1.35%	11.0	0.84%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-1.534e+00	0.5427	73.0	16.40%	192.7	14.76%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-1.477e+00	0.5729	9.0	2.02%	18.1	1.38%
AT1G19040(NAC)/col-AT1G19040-DAP-Seq(GSE60143)/Homer	CTTGNDNHNCAAGYW	1e0	-1.428e+00	0.6001	12.0	2.70%	26.2	2.00%
STOP1(C2H2)/colamp-STOP1-DAP-Seq(GSE60143)/Homer	DTATCTGGKGRAGGT	1e0	-1.405e+00	0.6126	40.0	8.99%	102.5	7.85%
DAG2(C2C2dof)/col-DAG2-DAP-Seq(GSE60143)/Homer	WWTTHACTTTTT	1e0	-1.388e+00	0.6213	144.0	32.36%	398.3	30.50%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-1.379e+00	0.6258	13.0	2.92%	29.3	2.24%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.350e+00	0.6424	11.0	2.47%	24.7	1.89%
AT1G69570(C2C2dof)/col-AT1G69570-DAP-Seq(GSE60143)/Homer	WAAAAGTGHH	1e0	-1.308e+00	0.6683	136.0	30.56%	377.0	28.87%
THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer	GGTCACCTGAGGTCA	1e0	-1.273e+00	0.6906	31.0	6.97%	79.6	6.10%
TAGL1(MADS)/Tomato-TAGL1-ChIP-Seq(GSE116581)/Homer	CCAAAAATRG	1e0	-1.248e+00	0.7060	107.0	24.04%	295.3	22.61%
dof45(C2C2dof)/col-dof45-DAP-Seq(GSE60143)/Homer	NVAWAAAGTN	1e0	-1.214e+00	0.7284	208.0	46.74%	589.9	45.17%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-1.189e+00	0.7437	37.0	8.31%	97.8	7.49%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.189e+00	0.7437	37.0	8.31%	97.3	7.45%
At4g38000(C2C2dof)/col-At4g38000-DAP-Seq(GSE60143)/Homer	WWWTWACTTTTT	1e0	-1.129e+00	0.7879	108.0	24.27%	301.3	23.07%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-1.117e+00	0.7954	5.0	1.12%	10.8	0.83%
DREB19(AP2EREBP)/colamp-DREB19-DAP-Seq(GSE60143)/Homer	AATGTCGGTK	1e0	-1.085e+00	0.8191	84.0	18.88%	233.2	17.86%
ANAC017(NAC)/colamp-ANAC017-DAP-Seq(GSE60143)/Homer	TMCTTGNNNNNCAAG	1e0	-9.619e-01	0.9242	13.0	2.92%	33.2	2.54%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-9.426e-01	0.9400	82.0	18.43%	231.5	17.73%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-9.029e-01	0.9757	17.0	3.82%	45.8	3.50%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-8.312e-01	1.0000	43.0	9.66%	121.8	9.32%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-7.663e-01	1.0000	8.0	1.80%	21.9	1.68%
GATA14(C2C2gata)/col-GATA14-DAP-Seq(GSE60143)/Homer	AYCAGATCTG	1e0	-7.508e-01	1.0000	79.0	17.75%	228.4	17.49%
bZIP44(bZIP)/colamp-bZIP44-DAP-Seq(GSE60143)/Homer	NDTGCCACGTCAGCH	1e0	-7.415e-01	1.0000	2.0	0.45%	4.1	0.32%
WUS1(Homeobox)/colamp-WUS1-DAP-Seq(GSE60143)/Homer	CAWTCATTCA	1e0	-7.201e-01	1.0000	39.0	8.76%	112.8	8.64%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-7.139e-01	1.0000	15.0	3.37%	42.1	3.22%
SFP1/SacCer-Promoters/Homer	DDAAAAATTTTY	1e0	-7.052e-01	1.0000	4.0	0.90%	11.0	0.84%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-6.922e-01	1.0000	20.0	4.49%	57.3	4.39%
ATHB13(Homeobox)/col-ATHB13-DAP-Seq(GSE60143)/Homer	CAATAATT	1e0	-6.823e-01	1.0000	113.0	25.39%	330.9	25.34%
AT1G12630(AP2EREBP)/colamp-AT1G12630-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	-6.045e-01	1.0000	81.0	18.20%	239.3	18.33%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-5.956e-01	1.0000	6.0	1.35%	17.9	1.37%
At2g45680(TCP)/colamp-At2g45680-DAP-Seq(GSE60143)/Homer	GTGGGNCCCACNDND	1e0	-5.894e-01	1.0000	4.0	0.90%	11.0	0.84%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-5.559e-01	1.0000	120.0	26.97%	356.0	27.26%
RIN(MADS)/Tomato-RIN-ChIP-Seq(GSE116581)/Homer	CYAAAAWWGG	1e0	-5.251e-01	1.0000	109.0	24.49%	326.0	24.96%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-5.145e-01	1.0000	6.0	1.35%	18.9	1.44%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-4.400e-01	1.0000	2.0	0.45%	6.4	0.49%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-4.239e-01	1.0000	49.0	11.01%	151.0	11.56%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-4.110e-01	1.0000	4.0	0.90%	13.2	1.01%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-3.694e-01	1.0000	1.0	0.22%	3.2	0.24%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-3.694e-01	1.0000	1.0	0.22%	3.8	0.29%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-3.649e-01	1.0000	5.0	1.12%	18.0	1.38%
At4g01280(MYBrelated)/colamp-At4g01280-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-3.562e-01	1.0000	50.0	11.24%	157.5	12.06%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-3.559e-01	1.0000	20.0	4.49%	65.3	5.00%
ATHB15(HB)/col-ATHB15-DAP-Seq(GSE60143)/Homer	GYAATSATTA	1e0	-3.407e-01	1.0000	36.0	8.09%	115.4	8.84%
At1g68670(G2like)/colamp-At1g68670-DAP-Seq(GSE60143)/Homer	WNWWHNRAAGATTCT	1e0	-3.049e-01	1.0000	41.0	9.21%	132.7	10.16%
ANAC103(NAC)/col-ANAC103-DAP-Seq(GSE60143)/Homer	AACTTGNWNWNCAAG	1e0	-3.001e-01	1.0000	28.0	6.29%	92.8	7.10%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-2.851e-01	1.0000	4.0	0.90%	15.5	1.19%
Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer	TAAYCYAATCAA	1e0	-2.813e-01	1.0000	6.0	1.35%	22.6	1.73%
EIN3(EIL)/col-EIN3-DAP-Seq(GSE60143)/Homer	ARATTCAATGWATYT	1e0	-2.789e-01	1.0000	12.0	2.70%	43.0	3.29%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-2.717e-01	1.0000	8.0	1.80%	29.2	2.23%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-2.717e-01	1.0000	8.0	1.80%	29.2	2.23%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-2.617e-01	1.0000	30.0	6.74%	100.2	7.67%
GT1(Trihelix)/col-GT1-DAP-Seq(GSE60143)/Homer	TTAACCATGGTTAAD	1e0	-2.616e-01	1.0000	1.0	0.22%	4.3	0.33%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-2.615e-01	1.0000	5.0	1.12%	19.2	1.47%
PHV(HB)/col-PHV-DAP-Seq(GSE60143)/Homer	RTAATSATTA	1e0	-2.568e-01	1.0000	36.0	8.09%	119.7	9.16%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-2.568e-01	1.0000	46.0	10.34%	150.4	11.52%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer	NNAYTTCCTGHN	1e0	-2.504e-01	1.0000	42.0	9.44%	138.2	10.59%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-2.492e-01	1.0000	9.0	2.02%	33.9	2.60%
AT2G28920(ND)/col-AT2G28920-DAP-Seq(GSE60143)/Homer	WAGATATTTWTW	1e0	-2.425e-01	1.0000	19.0	4.27%	66.5	5.10%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-2.409e-01	1.0000	37.0	8.31%	123.9	9.49%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-2.314e-01	1.0000	64.0	14.38%	207.9	15.92%
LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer	ADAAATATCT	1e0	-2.247e-01	1.0000	109.0	24.49%	344.7	26.40%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-2.055e-01	1.0000	6.0	1.35%	24.6	1.89%
At3g45610(C2C2dof)/col-At3g45610-DAP-Seq(GSE60143)/Homer	TWACTTTTTS	1e0	-1.940e-01	1.0000	114.0	25.62%	362.6	27.77%
At1g78700(BZR)/col-At1g78700-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNNNNN	1e0	-1.930e-01	1.0000	26.0	5.84%	91.4	7.00%
At5g52660(MYBrelated)/colamp-At5g52660-DAP-Seq(GSE60143)/Homer	HAAAAATATCTW	1e0	-1.927e-01	1.0000	31.0	6.97%	107.9	8.26%
bHLH157(bHLH)/col-bHLH157-DAP-Seq(GSE60143)/Homer	KACACGTCTCTY	1e0	-1.927e-01	1.0000	31.0	6.97%	107.3	8.22%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-1.905e-01	1.0000	36.0	8.09%	123.5	9.46%
bHLH34(bHLH)/colamp-bHLH34-DAP-Seq(GSE60143)/Homer	HGWGRHWGACACGTG	1e0	-1.855e-01	1.0000	24.0	5.39%	85.2	6.53%
EIL4(EIL)/Tomato-EIL4-ChIP-Seq(GSE116581)/Homer	GATTCAWTGAAT	1e0	-1.783e-01	1.0000	8.0	1.80%	32.3	2.48%
Unknown4/Arabidopsis-Promoters/Homer	CKTCKTCTTY	1e0	-1.666e-01	1.0000	71.0	15.96%	234.8	17.98%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.632e-01	1.0000	19.0	4.27%	70.4	5.39%
ERF105(AP2EREBP)/colamp-ERF105-DAP-Seq(GSE60143)/Homer	TGGCGGCT	1e0	-1.632e-01	1.0000	80.0	17.98%	263.0	20.14%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.543e-01	1.0000	8.0	1.80%	33.9	2.59%
Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer	AAGCACGTGBGD	1e0	-1.433e-01	1.0000	13.0	2.92%	51.7	3.96%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-1.431e-01	1.0000	121.0	27.19%	389.1	29.80%
IDD2(C2H2)/colamp-IDD2-DAP-Seq(GSE60143)/Homer	HAVAAAAMGACAAAA	1e0	-1.342e-01	1.0000	4.0	0.90%	19.6	1.50%
SGR5(C2H2)/colamp-SGR5-DAP-Seq(GSE60143)/Homer	TTTGTCTTTTTT	1e0	-1.338e-01	1.0000	44.0	9.89%	153.5	11.75%
At3g09600(MYBrelated)/colamp-At3g09600-DAP-Seq(GSE60143)/Homer	AAAATATCTT	1e0	-1.235e-01	1.0000	34.0	7.64%	122.3	9.36%
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer	AAWCTAGGTCARDNN	1e0	-1.206e-01	1.0000	7.0	1.57%	31.1	2.38%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-1.184e-01	1.0000	10.0	2.25%	42.8	3.28%
NLP7(RWPRK)/col-NLP7-DAP-Seq(GSE60143)/Homer	TGRCCYTTCR	1e0	-1.169e-01	1.0000	136.0	30.56%	438.9	33.61%
KLF1(Zf)/HUDEP2-KLF1-CutnRun(GSE136251)/Homer	VDGGGYGGGGCY	1e0	-1.148e-01	1.0000	27.0	6.07%	100.7	7.71%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.095e-01	1.0000	5.0	1.12%	25.0	1.91%
ANAC013(NAC)/col-ANAC013-DAP-Seq(GSE60143)/Homer	CTTGNNNNNCAAGNA	1e0	-1.075e-01	1.0000	28.0	6.29%	104.2	7.98%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-1.067e-01	1.0000	6.0	1.35%	28.7	2.20%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-9.863e-02	1.0000	8.0	1.80%	36.6	2.81%
At4g36780(BZR)/col-At4g36780-DAP-Seq(GSE60143)/Homer	NNNNNNCACGTGNNN	1e0	-9.826e-02	1.0000	25.0	5.62%	95.5	7.32%
Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer	VVRRAACAATGG	1e0	-8.259e-02	1.0000	23.0	5.17%	90.0	6.89%
ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer	GGAACAGCCG	1e0	-7.823e-02	1.0000	30.0	6.74%	114.8	8.79%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-7.766e-02	1.0000	10.0	2.25%	45.2	3.46%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-7.766e-02	1.0000	10.0	2.25%	45.5	3.48%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-7.344e-02	1.0000	1.0	0.22%	8.5	0.65%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-7.344e-02	1.0000	1.0	0.22%	8.7	0.66%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-7.081e-02	1.0000	27.0	6.07%	105.9	8.11%
NUC(C2H2)/col-NUC-DAP-Seq(GSE60143)/Homer	HAVAAAACGACAAAA	1e0	-6.993e-02	1.0000	3.0	0.67%	18.8	1.44%
BIM3(bHLH)/col-BIM3-DAP-Seq(GSE60143)/Homer	TWVTCACGTGAB	1e0	-6.990e-02	1.0000	9.0	2.02%	42.9	3.28%
Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer	TCACGTGAYH	1e0	-6.860e-02	1.0000	19.0	4.27%	78.8	6.04%
PIF7(bHLH)/col-PIF7-DAP-Seq(GSE60143)/Homer	CCACGTGGNH	1e0	-6.004e-02	1.0000	9.0	2.02%	43.7	3.35%
TCP3(TCP)/colamp-TCP3-DAP-Seq(GSE60143)/Homer	WGTGGTCCCAAHWWW	1e0	-5.858e-02	1.0000	13.0	2.92%	58.7	4.50%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-5.719e-02	1.0000	22.0	4.94%	90.9	6.96%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-5.607e-02	1.0000	3.0	0.67%	19.2	1.47%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-5.415e-02	1.0000	1.0	0.22%	9.1	0.70%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-5.415e-02	1.0000	1.0	0.22%	9.5	0.73%
JKD(C2H2)/col-JKD-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTT	1e0	-5.334e-02	1.0000	7.0	1.57%	36.2	2.78%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-5.234e-02	1.0000	5.0	1.12%	28.3	2.17%
BZR1(BZR)/col-BZR1-DAP-Seq(GSE60143)/Homer	NNCRCACGTGCG	1e0	-5.234e-02	1.0000	5.0	1.12%	28.7	2.19%
MYB40(MYB)/col-MYB40-DAP-Seq(GSE60143)/Homer	TGGTAGGTRARA	1e0	-5.066e-02	1.0000	24.0	5.39%	98.5	7.54%
ASL18(LOBAS2)/colamp-ASL18-DAP-Seq(GSE60143)/Homer	CCGGAAAWTCMGGAR	1e0	-5.056e-02	1.0000	122.0	27.42%	410.1	31.41%
E-box/Drosophila-Promoters/Homer	AACAGCTGTTHN	1e0	-4.500e-02	1.0000	7.0	1.57%	37.4	2.87%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-4.486e-02	1.0000	3.0	0.67%	20.7	1.58%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-4.427e-02	1.0000	16.0	3.60%	71.9	5.51%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-4.283e-02	1.0000	38.0	8.54%	147.1	11.27%
LMI1(HB)/colamp-LMI1-DAP-Seq(GSE60143)/Homer	AATTATTG	1e0	-4.238e-02	1.0000	65.0	14.61%	235.7	18.05%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-4.021e-02	1.0000	39.0	8.76%	151.6	11.61%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-4.002e-02	1.0000	1.0	0.22%	10.3	0.79%
MYB39(MYB)/col-MYB39-DAP-Seq(GSE60143)/Homer	WWAARKTAGGTGRAA	1e0	-3.794e-02	1.0000	8.0	1.80%	42.4	3.25%
Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer	TGWAAYCTGABACCB	1e0	-3.627e-02	1.0000	2.0	0.45%	16.1	1.23%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-3.597e-02	1.0000	33.0	7.42%	132.3	10.13%
Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer	YSTGGGTGGTCT	1e0	-3.567e-02	1.0000	5.0	1.12%	30.1	2.31%
bHLH18(bHLH)/col-bHLH18-DAP-Seq(GSE60143)/Homer	CACGTGTTYCACGTG	1e0	-2.963e-02	1.0000	1.0	0.22%	11.2	0.86%
RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer	TWWTTTCTGTTG	1e0	-2.756e-02	1.0000	34.0	7.64%	138.5	10.61%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-2.196e-02	1.0000	1.0	0.22%	12.1	0.92%
EPR1(MYBrelated)/colamp-EPR1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-2.172e-02	1.0000	27.0	6.07%	116.1	8.89%
LHY1(MYBrelated)/col-LHY1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-2.172e-02	1.0000	27.0	6.07%	116.1	8.89%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-2.161e-02	1.0000	4.0	0.90%	28.9	2.21%
AGL15(MADS)/col-AGL15-DAP-Seq(GSE60143)/Homer	TTTCCHWATWDGGAA	1e0	-1.973e-02	1.0000	5.0	1.12%	33.1	2.54%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-1.940e-02	1.0000	46.0	10.34%	182.1	13.95%
AIL7(AP2EREBP)/colamp-AIL7-DAP-Seq(GSE60143)/Homer	KCACRAWTYYCGAGG	1e0	-1.718e-02	1.0000	40.0	8.99%	163.9	12.55%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.585e-02	1.0000	14.0	3.15%	71.8	5.50%
WRKY11(WRKY)/col-WRKY11-DAP-Seq(GSE60143)/Homer	SCGTTGACTTTN	1e0	-1.451e-02	1.0000	6.0	1.35%	39.4	3.02%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-1.427e-02	1.0000	3.0	0.67%	25.8	1.97%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-1.427e-02	1.0000	3.0	0.67%	25.1	1.93%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.409e-02	1.0000	10.0	2.25%	56.6	4.34%
TRP2(MYBrelated)/colamp-TRP2-DAP-Seq(GSE60143)/Homer	TAAACCCT	1e0	-1.349e-02	1.0000	8.0	1.80%	48.4	3.71%
At1g14580(C2H2)/colamp-At1g14580-DAP-Seq(GSE60143)/Homer	CASAAAAMGACAAAA	1e0	-1.314e-02	1.0000	5.0	1.12%	35.2	2.69%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-1.304e-02	1.0000	2.0	0.45%	20.7	1.58%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.304e-02	1.0000	2.0	0.45%	20.9	1.60%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-1.208e-02	1.0000	44.0	9.89%	180.0	13.78%
At5g66730(C2H2)/colamp-At5g66730-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTK	1e0	-1.201e-02	1.0000	12.0	2.70%	65.7	5.03%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-1.177e-02	1.0000	19.0	4.27%	92.8	7.10%
Unknown1/Arabidopsis-Promoters/Homer	RGGGTAWWWTHGTAA	1e0	-1.129e-02	1.0000	4.0	0.90%	32.0	2.45%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-8.972e-03	1.0000	1.0	0.22%	15.3	1.17%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-8.039e-03	1.0000	6.0	1.35%	42.7	3.27%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-7.010e-03	1.0000	3.0	0.67%	28.5	2.18%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-6.662e-03	1.0000	1.0	0.22%	16.9	1.30%
AT1G71450(AP2EREBP)/col-AT1G71450-DAP-Seq(GSE60143)/Homer	DHDWTGTCGGTG	1e0	-6.495e-03	1.0000	147.0	33.03%	515.8	39.50%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-6.275e-03	1.0000	12.0	2.70%	69.3	5.30%
ANL2(HB)/col-ANL2-DAP-Seq(GSE60143)/Homer	CATTAATTGC	1e0	-5.992e-03	1.0000	31.0	6.97%	141.0	10.80%
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer	WAABTAGGTCAV	1e0	-5.971e-03	1.0000	2.0	0.45%	23.6	1.81%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-5.404e-03	1.0000	28.0	6.29%	131.2	10.04%
AT1G01250(AP2EREBP)/col-AT1G01250-DAP-Seq(GSE60143)/Homer	YCACCGACAHTW	1e0	-4.595e-03	1.0000	5.0	1.12%	40.5	3.10%
ANAC011(NAC)/col-ANAC011-DAP-Seq(GSE60143)/Homer	TDCTTGYRNNDCAAG	1e0	-4.592e-03	1.0000	15.0	3.37%	84.0	6.43%
WRKY46(WRKY)/colamp-WRKY46-DAP-Seq(GSE60143)/Homer	AAAGTCAACGSN	1e0	-4.589e-03	1.0000	2.0	0.45%	24.9	1.91%
LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer	CCTTTGATST	1e0	-4.441e-03	1.0000	32.0	7.19%	147.2	11.27%
ANAC038(NAC)/col-ANAC038-DAP-Seq(GSE60143)/Homer	ACACGTWAYC	1e0	-4.107e-03	1.0000	181.0	40.67%	623.6	47.75%
ANAC087(NAC)/col-ANAC087-DAP-Seq(GSE60143)/Homer	WVCKTGHNNNWCAMG	1e0	-3.978e-03	1.0000	26.0	5.84%	126.0	9.65%
GBF6(bZIP)/colamp-GBF6-DAP-Seq(GSE60143)/Homer	WWTGMCACGTCABCW	1e0	-2.809e-03	1.0000	14.0	3.15%	82.8	6.34%
Unknown3/Drosophila-Promoters/Homer	ACVAKCTGGCAGCGC	1e0	-2.728e-03	1.0000	1.0	0.22%	19.1	1.46%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-2.715e-03	1.0000	7.0	1.57%	52.1	3.99%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-2.653e-03	1.0000	3.0	0.67%	32.8	2.51%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-2.653e-03	1.0000	3.0	0.67%	32.1	2.46%
NTM1(NAC)/col-NTM1-DAP-Seq(GSE60143)/Homer	ACTTRTARAASAAGT	1e0	-2.604e-03	1.0000	22.0	4.94%	114.2	8.74%
ANAC075(NAC)/col-ANAC075-DAP-Seq(GSE60143)/Homer	CTTSWWNWWSAAGYT	1e0	-2.380e-03	1.0000	25.0	5.62%	126.1	9.66%
CUC3(NAC)/col-CUC3-DAP-Seq(GSE60143)/Homer	TRCKTGWNNNACAMG	1e0	-2.216e-03	1.0000	27.0	6.07%	134.1	10.27%
AT5G59990(C2C2COlike)/colamp-AT5G59990-DAP-Seq(GSE60143)/Homer	TCTCAACCGTTCATT	1e0	-2.025e-03	1.0000	1.0	0.22%	20.4	1.56%
Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer	CCCACGTGCT	1e0	-2.015e-03	1.0000	20.0	4.49%	108.3	8.29%
At2g33710(AP2EREBP)/colamp-At2g33710-DAP-Seq(GSE60143)/Homer	WTKGCGGCKR	1e0	-1.993e-03	1.0000	134.0	30.11%	489.5	37.49%
HAT5(Homeobox)/colamp-HAT5-DAP-Seq(GSE60143)/Homer	DCAATWATTG	1e0	-1.807e-03	1.0000	7.0	1.57%	54.4	4.17%
At5g29000(G2like)/col-At5g29000-DAP-Seq(GSE60143)/Homer	RGAATATTCYHH	1e0	-1.760e-03	1.0000	17.0	3.82%	98.0	7.50%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.753e-03	1.0000	175.0	39.33%	615.2	47.11%
CUC2(NAC)/colamp-CUC2-DAP-Seq(GSE60143)/Homer	TRCKTGTNNNWCAMG	1e0	-1.734e-03	1.0000	26.0	5.84%	132.0	10.11%
ANAC028(NAC)/col-ANAC028-DAP-Seq(GSE60143)/Homer	WRCTTGNNNNNCAAG	1e0	-1.684e-03	1.0000	43.0	9.66%	194.3	14.88%
AT2G31460(REMB3)/col-AT2G31460-DAP-Seq(GSE60143)/Homer	WNWARWDGAAATGAT	1e0	-1.683e-03	1.0000	8.0	1.80%	59.1	4.53%
NTM2(NAC)/col-NTM2-DAP-Seq(GSE60143)/Homer	CTTRTNNNAYAAGBH	1e0	-1.574e-03	1.0000	32.0	7.19%	155.5	11.91%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-1.504e-03	1.0000	1.0	0.22%	21.7	1.66%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-1.277e-03	1.0000	18.0	4.04%	103.6	7.93%
IDD7(C2H2)/col-IDD7-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTN	1e0	-1.234e-03	1.0000	15.0	3.37%	92.0	7.04%
AT1G04880(ARID)/colamp-AT1G04880-DAP-Seq(GSE60143)/Homer	AAACTATATADTATA	1e0	-1.210e-03	1.0000	2.0	0.45%	29.9	2.29%
At5g65130(AP2EREBP)/colamp-At5g65130-DAP-Seq(GSE60143)/Homer	CCRCCGACAWTN	1e0	-1.149e-03	1.0000	10.0	2.25%	70.1	5.37%
GATA19(C2C2gata)/colamp-GATA19-DAP-Seq(GSE60143)/Homer	ATCSGATCVG	1e0	-1.148e-03	1.0000	4.0	0.90%	41.4	3.17%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.115e-03	1.0000	143.0	32.13%	523.3	40.08%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-1.086e-03	1.0000	18.0	4.04%	104.8	8.02%
ANAC050(NAC)/colamp-ANAC050-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAAG	1e0	-1.003e-03	1.0000	33.0	7.42%	162.3	12.43%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-9.690e-04	1.0000	7.0	1.57%	57.7	4.42%
bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer	KCACGTGMCN	1e0	-9.240e-04	1.0000	87.0	19.55%	348.7	26.71%
ANAC053(NAC)/colamp-ANAC053-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e0	-8.860e-04	1.0000	29.0	6.52%	148.7	11.39%
CUC1(NAC)/col-CUC1-DAP-Seq(GSE60143)/Homer	TACTTGTNNNACAAG	1e0	-8.860e-04	1.0000	29.0	6.52%	148.2	11.35%
ABF2(bZIP)/col-ABF2-DAP-Seq(GSE60143)/Homer	KGMCACGTGDCMHHH	1e0	-8.540e-04	1.0000	11.0	2.47%	76.5	5.86%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-8.290e-04	1.0000	1.0	0.22%	23.9	1.83%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-7.040e-04	1.0000	2.0	0.45%	31.4	2.41%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-6.560e-04	1.0000	120.0	26.97%	457.1	35.01%
AT1G24250(Orphan)/col-AT1G24250-DAP-Seq(GSE60143)/Homer	KTDGTTGGTDGTTGG	1e0	-6.350e-04	1.0000	7.0	1.57%	59.3	4.54%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-6.150e-04	1.0000	1.0	0.22%	24.1	1.85%
PLT3(AP2EREBP)/col-PLT3-DAP-Seq(GSE60143)/Homer	GCACGNWTHYCGAGG	1e0	-6.150e-04	1.0000	1.0	0.22%	24.2	1.86%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-5.910e-04	1.0000	3.0	0.67%	38.3	2.93%
E-box/Arabidopsis-Promoters/Homer	GCCACGTG	1e0	-5.740e-04	1.0000	29.0	6.52%	151.2	11.58%
SVP(MADS)/col-SVP-DAP-Seq(GSE60143)/Homer	ANTTWCCHAATTTGG	1e0	-5.700e-04	1.0000	21.0	4.72%	120.4	9.22%
ANAC005(NAC)/col-ANAC005-DAP-Seq(GSE60143)/Homer	WVCTTVTWNHABAAG	1e0	-5.610e-04	1.0000	18.0	4.04%	108.8	8.34%
SPL3(SBP)/colamp-SPL3-DAP-Seq(GSE60143)/Homer	WDTTGTACGGAH	1e0	-5.610e-04	1.0000	4.0	0.90%	44.5	3.41%
ABF1(bZIP)/Arabidopsis-ABF1-ChIP-Seq(GSE80564)/Homer	CACGTGGC	1e0	-5.180e-04	1.0000	46.0	10.34%	214.8	16.45%
O2(bZIP)/Corn-O2-ChIP-Seq(GSE63991)/Homer	GCTGACGTGGCA	1e0	-4.580e-04	1.0000	3.0	0.67%	39.6	3.03%
HSF6(HSF)/col-HSF6-DAP-Seq(GSE60143)/Homer	TTYTAGAAGCTTCTA	1e0	-4.400e-04	1.0000	4.0	0.90%	45.9	3.52%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-4.340e-04	1.0000	12.0	2.70%	84.6	6.48%
CAMTA5(CAMTA)/col-CAMTA5-DAP-Seq(GSE60143)/Homer	ACGCGTTTTANACRC	1e0	-4.210e-04	1.0000	40.0	8.99%	194.9	14.93%
DDF2(AP2EREBP)/col-DDF2-DAP-Seq(GSE60143)/Homer	GATGTCGRCR	1e0	-4.090e-04	1.0000	2.0	0.45%	33.0	2.53%
ANAC092(NAC)/colamp-ANAC092-DAP-Seq(GSE60143)/Homer	WRCKTGWNNNWCAMG	1e0	-3.860e-04	1.0000	27.0	6.07%	146.9	11.25%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-3.850e-04	1.0000	39.0	8.76%	191.2	14.64%
PLT1(AP2EREBP)/colamp-PLT1-DAP-Seq(GSE60143)/Homer	GCACGAWTYCCGAGG	1e0	-3.380e-04	1.0000	1.0	0.22%	26.3	2.01%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-3.110e-04	1.0000	2.0	0.45%	34.3	2.63%
ANAC096(NAC)/colamp-ANAC096-DAP-Seq(GSE60143)/Homer	TACTTGWNNNWCAAG	1e0	-3.010e-04	1.0000	35.0	7.87%	178.4	13.67%
M1BP(Zf)/S2R+-M1BP-ChIP-Seq(GSE49842)/Homer	CAGTGTGACCGT	1e0	-2.920e-04	1.0000	10.0	2.25%	77.5	5.93%
E2FA(E2FDP)/colamp-E2FA-DAP-Seq(GSE60143)/Homer	WWTGGCGCCAWWWNN	1e0	-2.900e-04	1.0000	73.0	16.40%	312.7	23.94%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-2.660e-04	1.0000	13.0	2.92%	91.6	7.01%
RVE1(MYBrelated)/col-RVE1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-2.650e-04	1.0000	41.0	9.21%	201.4	15.42%
bHLH74(bHLH)/col-bHLH74-DAP-Seq(GSE60143)/Homer	DRATCACGTGAB	1e0	-2.620e-04	1.0000	6.0	1.35%	58.9	4.51%
TATA-box/Drosophila-Promoters/Homer	CTATAAAAGCSV	1e0	-2.510e-04	1.0000	1.0	0.22%	28.0	2.14%
At4g18890(BZR)/col-At4g18890-DAP-Seq(GSE60143)/Homer	NDBRCACGTGYR	1e0	-2.440e-04	1.0000	5.0	1.12%	53.5	4.10%
PCF/Arabidopsis-Promoters/Homer	NNWWWTGGGCYTDDN	1e0	-2.210e-04	1.0000	11.0	2.47%	83.2	6.37%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-2.020e-04	1.0000	12.0	2.70%	88.6	6.79%
MYB44(MYB)/colamp-MYB44-DAP-Seq(GSE60143)/Homer	CVGTTWWKTCNGTTA	1e0	-1.860e-04	1.0000	1.0	0.22%	28.5	2.19%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.720e-04	1.0000	8.0	1.80%	70.6	5.41%
At1g77640(AP2EREBP)/col-At1g77640-DAP-Seq(GSE60143)/Homer	TGTCGGTGGA	1e0	-1.520e-04	1.0000	5.0	1.12%	56.0	4.29%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-1.520e-04	1.0000	27.0	6.07%	152.4	11.67%
NAC2(NAC)/colamp-NAC2-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e0	-1.500e-04	1.0000	34.0	7.64%	179.1	13.72%
AGL6(MADS)/col-AGL6-DAP-Seq(GSE60143)/Homer	TTWCCWWAWWDGGWA	1e0	-1.380e-04	1.0000	1.0	0.22%	29.2	2.23%
ANAC058(NAC)/col-ANAC058-DAP-Seq(GSE60143)/Homer	TWCTTGTDNNACAAG	1e0	-1.330e-04	1.0000	33.0	7.42%	176.0	13.48%
DREB26(AP2EREBP)/col-DREB26-DAP-Seq(GSE60143)/Homer	CCACCGACAH	1e0	-1.320e-04	1.0000	6.0	1.35%	61.1	4.68%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-1.290e-04	1.0000	4.0	0.90%	50.5	3.87%
ATHB34(ZFHD)/colamp-ATHB34-DAP-Seq(GSE60143)/Homer	TRATTARS	1e0	-1.270e-04	1.0000	76.0	17.08%	329.4	25.23%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-1.170e-04	1.0000	157.0	35.28%	588.2	45.05%
ATHB33(ZFHD)/col-ATHB33-DAP-Seq(GSE60143)/Homer	NGTRATTAAK	1e0	-1.030e-04	1.0000	118.0	26.52%	468.4	35.87%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-9.200e-05	1.0000	22.0	4.94%	135.9	10.41%
MYB94(MYB)/col-MYB94-DAP-Seq(GSE60143)/Homer	WGGTRGTTGGKA	1e0	-9.200e-05	1.0000	12.0	2.70%	92.6	7.09%
AT2G20400(G2like)/colamp-AT2G20400-DAP-Seq(GSE60143)/Homer	DNVGAATATTCBNHN	1e0	-8.800e-05	1.0000	7.0	1.57%	68.3	5.23%
bZIP48(bZIP)/colamp-bZIP48-DAP-Seq(GSE60143)/Homer	DDWWKVTSACGTGGC	1e0	-8.200e-05	1.0000	18.0	4.04%	120.0	9.19%
AT3G10113(MYBrelated)/col-AT3G10113-DAP-Seq(GSE60143)/Homer	WNAAATATCWWN	1e0	-7.900e-05	1.0000	27.0	6.07%	156.0	11.95%
ANAC020(NAC)/col-ANAC020-DAP-Seq(GSE60143)/Homer	DVCKTGHNNNDCAAG	1e0	-7.700e-05	1.0000	36.0	8.09%	191.6	14.67%
AREB3(bZIP)/col-AREB3-DAP-Seq(GSE60143)/Homer	NKGMCACGTGDCMNN	1e0	-7.400e-05	1.0000	20.0	4.49%	128.8	9.86%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-6.900e-05	1.0000	10.0	2.25%	84.5	6.47%
bZIP3(bZIP)/col-bZIP3-DAP-Seq(GSE60143)/Homer	DWKNHSACGTGGCAD	1e0	-6.600e-05	1.0000	29.0	6.52%	165.6	12.68%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-5.700e-05	1.0000	18.0	4.04%	121.6	9.31%
VND3(NAC)/colamp-VND3-DAP-Seq(GSE60143)/Homer	TRCTTGWDNHWCAAG	1e0	-4.900e-05	1.0000	36.0	8.09%	194.7	14.91%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e0	-4.700e-05	1.0000	4.0	0.90%	54.7	4.19%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-4.500e-05	1.0000	2.0	0.45%	41.1	3.15%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-4.400e-05	1.0000	83.0	18.65%	361.3	27.67%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-3.500e-05	1.0000	7.0	1.57%	72.2	5.53%
Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer	MYGGTCACACTG	1e0	-2.200e-05	1.0000	5.0	1.12%	63.8	4.88%
BAM8(BES1)/col-BAM8-DAP-Seq(GSE60143)/Homer	NNWSACACGTGTSWN	1e0	-2.000e-05	1.0000	3.0	0.67%	51.4	3.93%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.900e-05	1.0000	16.0	3.60%	118.1	9.04%
Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer	TTAATTNAATTA	1e0	-1.700e-05	1.0000	5.0	1.12%	64.6	4.95%
DEAR5(AP2EREBP)/col-DEAR5-DAP-Seq(GSE60143)/Homer	NDWTGTCGGTGRWDN	1e0	-1.500e-05	1.0000	8.0	1.80%	81.6	6.25%
bZIP53(bZIP)/colamp-bZIP53-DAP-Seq(GSE60143)/Homer	NDNHSACGTGKMNNN	1e0	-1.400e-05	1.0000	19.0	4.27%	133.3	10.21%
CEJ1(AP2EREBP)/col-CEJ1-DAP-Seq(GSE60143)/Homer	WWTGTCGGTG	1e0	-1.100e-05	1.0000	90.0	20.22%	395.2	30.26%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-1.100e-05	1.0000	125.0	28.09%	509.1	38.99%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.000e-05	1.0000	5.0	1.12%	67.0	5.13%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-1.000e-05	1.0000	37.0	8.31%	208.4	15.96%
VIP1(bZIP)/col-VIP1-DAP-Seq(GSE60143)/Homer	NTTGACAGCTGTCAN	1e0	-9.000e-06	1.0000	1.0	0.22%	38.4	2.94%
LBD23(LOBAS2)/colamp-LBD23-DAP-Seq(GSE60143)/Homer	GCGNAWWWTNCGCYW	1e0	-9.000e-06	1.0000	83.0	18.65%	373.5	28.61%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-9.000e-06	1.0000	165.0	37.08%	634.5	48.59%
ATHB53(HB)/col-ATHB53-DAP-Seq(GSE60143)/Homer	CAATAATT	1e0	-8.000e-06	1.0000	25.0	5.62%	161.9	12.40%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-8.000e-06	1.0000	2.0	0.45%	47.7	3.66%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-8.000e-06	1.0000	10.0	2.25%	94.3	7.22%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-8.000e-06	1.0000	6.0	1.35%	74.0	5.67%
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer	TGATKGATGR	1e0	-7.000e-06	1.0000	7.0	1.57%	79.1	6.06%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-6.000e-06	1.0000	2.0	0.45%	48.8	3.73%
MYB10(MYB)/col-MYB10-DAP-Seq(GSE60143)/Homer	YCCACCTACCHH	1e0	-6.000e-06	1.0000	16.0	3.60%	124.9	9.56%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-5.000e-06	1.0000	3.0	0.67%	56.7	4.35%
Replumless(BLH)/Arabidopsis-RPL.GFP-ChIP-Seq(GSE78727)/Homer	HGTCWHATCA	1e0	-5.000e-06	1.0000	77.0	17.30%	357.3	27.37%
At4g32800(AP2EREBP)/colamp-At4g32800-DAP-Seq(GSE60143)/Homer	DYCACCGACAHWWWH	1e0	-5.000e-06	1.0000	4.0	0.90%	63.9	4.90%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-5.000e-06	1.0000	23.0	5.17%	156.7	12.00%
At1g36060(AP2EREBP)/colamp-At1g36060-DAP-Seq(GSE60143)/Homer	NNWWKGTCGGTG	1e0	-4.000e-06	1.0000	52.0	11.69%	270.9	20.74%
At4g28140(AP2EREBP)/colamp-At4g28140-DAP-Seq(GSE60143)/Homer	DCCACCGACCAW	1e0	-3.000e-06	1.0000	14.0	3.15%	118.4	9.07%
AtIDD11(C2H2)/colamp-AtIDD11-DAP-Seq(GSE60143)/Homer	TTTGTCGTTT	1e0	-3.000e-06	1.0000	8.0	1.80%	88.7	6.79%
MGP(C2H2)/colamp-MGP-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTW	1e0	-3.000e-06	1.0000	4.0	0.90%	65.5	5.02%
ANAC016(NAC)/col-ANAC016-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAMG	1e0	-2.000e-06	1.0000	41.0	9.21%	233.8	17.90%
bZIP28(bZIP)/col-bZIP28-DAP-Seq(GSE60143)/Homer	TGCCACGTSABH	1e0	-2.000e-06	1.0000	10.0	2.25%	101.8	7.79%
RKD2(RWPRK)/colamp-RKD2-DAP-Seq(GSE60143)/Homer	GACKTTTCRDCTTCC	1e0	-2.000e-06	1.0000	31.0	6.97%	195.8	14.99%
Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer	KBCTACCTGW	1e0	-1.000e-06	1.0000	16.0	3.60%	131.9	10.10%
GBF5(bZIP)/colamp-GBF5-DAP-Seq(GSE60143)/Homer	WKNWSACGTGGCAWN	1e0	-1.000e-06	1.0000	10.0	2.25%	102.4	7.84%
ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer	GGCGGCTR	1e0	-1.000e-06	1.0000	7.0	1.57%	86.6	6.63%
MYB63(MYB)/col-MYB63-DAP-Seq(GSE60143)/Homer	BHYACCWACCHH	1e0	-1.000e-06	1.0000	15.0	3.37%	127.3	9.75%
ANAC057(NAC)/colamp-ANAC057-DAP-Seq(GSE60143)/Homer	DVCKTGNNNNNCAMG	1e0	-1.000e-06	1.0000	39.0	8.76%	229.9	17.61%
SND2(NAC)/colamp-SND2-DAP-Seq(GSE60143)/Homer	CTTVWNNNWBAAGNW	1e0	-1.000e-06	1.0000	28.0	6.29%	185.6	14.21%
RAP21(AP2EREBP)/colamp-RAP21-DAP-Seq(GSE60143)/Homer	BCACCGACAHNN	1e0	-1.000e-06	1.0000	9.0	2.02%	98.1	7.51%
bHLH28(bHLH)/col-bHLH28-DAP-Seq(GSE60143)/Homer	NHHTGTACGGAH	1e0	-1.000e-06	1.0000	50.0	11.24%	272.8	20.89%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-1.000e-06	1.0000	7.0	1.57%	89.0	6.82%
dof42(C2C2dof)/col-dof42-DAP-Seq(GSE60143)/Homer	AAAAAGGC	1e0	-1.000e-06	1.0000	24.0	5.39%	171.8	13.15%
VND4(NAC)/colamp-VND4-DAP-Seq(GSE60143)/Homer	WRCTTGWANWWCAAG	1e0	-1.000e-06	1.0000	40.0	8.99%	237.7	18.20%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-0.000e+00	1.0000	13.0	2.92%	122.1	9.35%
MYB98(MYB)/col-MYB98-DAP-Seq(GSE60143)/Homer	NWDCCGTTAC	1e0	-0.000e+00	1.0000	21.0	4.72%	160.2	12.27%
AT1G44830(AP2EREBP)/col-AT1G44830-DAP-Seq(GSE60143)/Homer	NCCACCGACA	1e0	-0.000e+00	1.0000	8.0	1.80%	97.3	7.45%
At1g19210(AP2EREBP)/colamp-At1g19210-DAP-Seq(GSE60143)/Homer	HCACCGACCAHN	1e0	-0.000e+00	1.0000	113.0	25.39%	496.4	38.02%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-0.000e+00	1.0000	4.0	0.90%	73.1	5.59%
AT3G58630(Trihelix)/col-AT3G58630-DAP-Seq(GSE60143)/Homer	TCTCCGGCGA	1e0	-0.000e+00	1.0000	3.0	0.67%	67.8	5.19%
IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer	CACGTGCC	1e0	-0.000e+00	1.0000	97.0	21.80%	446.6	34.20%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-0.000e+00	1.0000	5.0	1.12%	81.0	6.20%
GBF3(bZIP)/Arabidopsis-GBF3-ChIP-Seq(GSE80564)/Homer	TGCCACGTSAYC	1e0	-0.000e+00	1.0000	10.0	2.25%	110.9	8.49%
Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer	NDGTAATTAC	1e0	-0.000e+00	1.0000	53.0	11.91%	292.6	22.40%
GATA6(C2C2gata)/col200-GATA6-DAP-Seq(GSE60143)/Homer	TAGATCTARAHH	1e0	-0.000e+00	1.0000	1.0	0.22%	51.4	3.94%
ERF2(AP2EREBP)/colamp-ERF2-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e0	-0.000e+00	1.0000	7.0	1.57%	94.7	7.25%
ATHB18(Homeobox)/colamp-ATHB18-DAP-Seq(GSE60143)/Homer	YCAATSATTG	1e0	-0.000e+00	1.0000	2.0	0.45%	61.6	4.71%
HAT1(Homeobox)/col-HAT1-DAP-Seq(GSE60143)/Homer	SCAATCATTGNN	1e0	-0.000e+00	1.0000	2.0	0.45%	61.2	4.69%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-0.000e+00	1.0000	2.0	0.45%	62.2	4.77%
AT4G18450(AP2EREBP)/col-AT4G18450-DAP-Seq(GSE60143)/Homer	ATGGCGGCKG	1e0	-0.000e+00	1.0000	3.0	0.67%	71.0	5.43%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-0.000e+00	1.0000	118.0	26.52%	520.5	39.86%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-0.000e+00	1.0000	80.0	17.98%	394.0	30.17%
FAR1(FAR1)/col-FAR1-DAP-Seq(GSE60143)/Homer	TKNNNYYCACGCGCY	1e0	-0.000e+00	1.0000	1.0	0.22%	54.8	4.20%
LEP(AP2EREBP)/col-LEP-DAP-Seq(GSE60143)/Homer	CDCCGCCGTC	1e0	-0.000e+00	1.0000	1.0	0.22%	54.7	4.19%
CREB5(bZIP)/LNCaP-CREB5.V5-ChIP-Seq(GSE137775)/Homer	VVATGACGTCAT	1e0	-0.000e+00	1.0000	7.0	1.57%	98.9	7.58%
SND3(NAC)/col-SND3-DAP-Seq(GSE60143)/Homer	CTTNHNNNDNAAGNH	1e0	-0.000e+00	1.0000	33.0	7.42%	221.6	16.97%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-0.000e+00	1.0000	4.0	0.90%	80.4	6.16%
Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer	TYTGACCASWRG	1e0	-0.000e+00	1.0000	14.0	3.15%	137.8	10.55%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-0.000e+00	1.0000	10.0	2.25%	117.3	8.98%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-0.000e+00	1.0000	81.0	18.20%	403.4	30.89%
MYB118(MYB)/colamp-MYB118-DAP-Seq(GSE60143)/Homer	TAWCCGTTAC	1e0	-0.000e+00	1.0000	27.0	6.07%	198.2	15.18%
ANAC071(NAC)/col-ANAC071-DAP-Seq(GSE60143)/Homer	DNCKTNDNNNHNAAG	1e0	-0.000e+00	1.0000	46.0	10.34%	276.6	21.18%
At2g41835(C2H2)/col-At2g41835-DAP-Seq(GSE60143)/Homer	TTTGAAAA	1e0	-0.000e+00	1.0000	7.0	1.57%	101.9	7.80%
ANAC004(NAC)/colamp-ANAC004-DAP-Seq(GSE60143)/Homer	WNCTTVYNNNRBAAG	1e0	-0.000e+00	1.0000	4.0	0.90%	82.1	6.29%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-0.000e+00	1.0000	29.0	6.52%	208.6	15.98%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-0.000e+00	1.0000	33.0	7.42%	225.6	17.27%
SPL13(SBP)/col-SPL13-DAP-Seq(GSE60143)/Homer	WAHTGTACGGAH	1e0	-0.000e+00	1.0000	8.0	1.80%	108.2	8.29%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e0	-0.000e+00	1.0000	11.0	2.47%	125.3	9.59%
TINY(AP2EREBP)/col-TINY-DAP-Seq(GSE60143)/Homer	NNCACCGACA	1e0	-0.000e+00	1.0000	11.0	2.47%	125.6	9.62%
AT3G57600(AP2EREBP)/col-AT3G57600-DAP-Seq(GSE60143)/Homer	GGCGGTGG	1e0	-0.000e+00	1.0000	13.0	2.92%	136.1	10.42%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-0.000e+00	1.0000	5.0	1.12%	91.5	7.01%
AT1G28160(AP2EREBP)/colamp-AT1G28160-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-0.000e+00	1.0000	75.0	16.85%	388.5	29.75%
SPL11(SBP)/col100-SPL11-DAP-Seq(GSE60143)/Homer	YTGTACTTBH	1e0	-0.000e+00	1.0000	40.0	8.99%	257.9	19.75%
ANAC062(NAC)/colamp-ANAC062-DAP-Seq(GSE60143)/Homer	TACTTANTNWNYAAG	1e0	-0.000e+00	1.0000	5.0	1.12%	93.0	7.12%
ERF5(AP2EREBP)/colamp-ERF5-DAP-Seq(GSE60143)/Homer	DCMGCCGCCA	1e0	-0.000e+00	1.0000	2.0	0.45%	70.3	5.38%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e0	-0.000e+00	1.0000	7.0	1.57%	106.0	8.12%
MYB13(MYB)/col-MYB13-DAP-Seq(GSE60143)/Homer	HYCACCWACCHH	1e0	-0.000e+00	1.0000	20.0	4.49%	173.7	13.30%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-0.000e+00	1.0000	1.0	0.22%	61.0	4.67%
AT1G20910(ARID)/col-AT1G20910-DAP-Seq(GSE60143)/Homer	THAATTRAWN	1e0	-0.000e+00	1.0000	106.0	23.82%	497.3	38.08%
CRC(C2C2YABBY)/col-CRC-DAP-Seq(GSE60143)/Homer	TWATSATA	1e0	-0.000e+00	1.0000	83.0	18.65%	419.7	32.14%
ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer	TTAACCCTTTVNKKN	1e0	-0.000e+00	1.0000	3.0	0.67%	79.8	6.11%
VND2(NAC)/col-VND2-DAP-Seq(GSE60143)/Homer	DNCKTNNNNNNNAAG	1e0	-0.000e+00	1.0000	46.0	10.34%	284.1	21.75%
VND1(NAC)/col-VND1-DAP-Seq(GSE60143)/Homer	CTTRWDNHWYAAGYW	1e0	-0.000e+00	1.0000	39.0	8.76%	257.7	19.73%
WRKY47(WRKY)/colamp-WRKY47-DAP-Seq(GSE60143)/Homer	WAAGTCAACGBT	1e0	-0.000e+00	1.0000	6.0	1.35%	101.2	7.75%
At2g44940(AP2EREBP)/colamp-At2g44940-DAP-Seq(GSE60143)/Homer	NYACCGACAHNNNNN	1e0	-0.000e+00	1.0000	9.0	2.02%	121.0	9.26%
MYB41(MYB)/col-MYB41-DAP-Seq(GSE60143)/Homer	BYTYACCTAA	1e0	-0.000e+00	1.0000	10.0	2.25%	127.9	9.79%
ESE1(AP2EREBP)/col-ESE1-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-0.000e+00	1.0000	8.0	1.80%	116.2	8.90%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-0.000e+00	1.0000	5.0	1.12%	98.7	7.56%
MYB121(MYB)/col-MYB121-DAP-Seq(GSE60143)/Homer	YNTACCTAACWW	1e0	-0.000e+00	1.0000	12.0	2.70%	141.0	10.80%
ARF16(ARF)/col-ARF16-DAP-Seq(GSE60143)/Homer	ATTTTACGAT	1e0	-0.000e+00	1.0000	15.0	3.37%	156.9	12.02%
ERF9(AP2EREBP)/colamp-ERF9-DAP-Seq(GSE60143)/Homer	AWATGGCGGCGG	1e0	-0.000e+00	1.0000	1.0	0.22%	66.3	5.07%
Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer	GATTTGCATA	1e0	-0.000e+00	1.0000	2.0	0.45%	76.1	5.83%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-0.000e+00	1.0000	54.0	12.13%	323.5	24.77%
bZIP16(bZIP)/colamp-bZIP16-DAP-Seq(GSE60143)/Homer	TGCCACGTGD	1e0	-0.000e+00	1.0000	7.0	1.57%	113.4	8.69%
SMB(NAC)/colamp-SMB-DAP-Seq(GSE60143)/Homer	CTTVNNNNDBAAGHW	1e0	-0.000e+00	1.0000	44.0	9.89%	286.6	21.95%
CRF4(AP2EREBP)/colamp-CRF4-DAP-Seq(GSE60143)/Homer	CGCCGCCA	1e0	-0.000e+00	1.0000	7.0	1.57%	114.5	8.77%
LOB(LOBAS2)/col-LOB-DAP-Seq(GSE60143)/Homer	CGCCGKAWWTTHCGS	1e0	-0.000e+00	1.0000	4.0	0.90%	95.0	7.27%
ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer	CTGCCWVCTTTTRTA	1e0	-0.000e+00	1.0000	12.0	2.70%	143.2	10.97%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-0.000e+00	1.0000	2.0	0.45%	79.8	6.11%
NST1(NAC)/colamp-NST1-DAP-Seq(GSE60143)/Homer	WRCTTRWWNWWYAAG	1e0	-0.000e+00	1.0000	40.0	8.99%	273.3	20.93%
TGA10(bZIP)/colamp-TGA10-DAP-Seq(GSE60143)/Homer	ATGACGTC	1e0	-0.000e+00	1.0000	29.0	6.52%	227.2	17.40%
bZIP68(bZIP)/col-bZIP68-DAP-Seq(GSE60143)/Homer	WGCCACGTGK	1e0	-0.000e+00	1.0000	11.0	2.47%	140.3	10.74%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-0.000e+00	1.0000	5.0	1.12%	104.4	8.00%
AT3G42860(zfGRF)/col-AT3G42860-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	-0.000e+00	1.0000	4.0	0.90%	97.5	7.46%
MYB96(MYB)/colamp-MYB96-DAP-Seq(GSE60143)/Homer	WGGTRGTTGG	1e0	-0.000e+00	1.0000	29.0	6.52%	229.6	17.58%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-0.000e+00	1.0000	64.0	14.38%	370.8	28.40%
MYB17(MYB)/colamp-MYB17-DAP-Seq(GSE60143)/Homer	GGTAGGTGRG	1e0	-0.000e+00	1.0000	12.0	2.70%	147.6	11.30%
bHLH130(bHLH)/col-bHLH130-DAP-Seq(GSE60143)/Homer	GCAACTTG	1e0	-0.000e+00	1.0000	17.0	3.82%	174.5	13.36%
CDM1(C3H)/colamp-CDM1-DAP-Seq(GSE60143)/Homer	CCGAWAWTWTCGGAN	1e0	-0.000e+00	1.0000	6.0	1.35%	112.4	8.61%
ABI5(bZIP)/col-ABI5-DAP-Seq(GSE60143)/Homer	GCCACGTG	1e0	-0.000e+00	1.0000	12.0	2.70%	148.1	11.34%
ATHB20(Homeobox)/colamp-ATHB20-DAP-Seq(GSE60143)/Homer	CAATHATT	1e0	-0.000e+00	1.0000	10.0	2.25%	138.1	10.58%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-0.000e+00	1.0000	25.0	5.62%	215.8	16.52%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-0.000e+00	1.0000	5.0	1.12%	107.5	8.23%
At1g22810(AP2EREBP)/colamp-At1g22810-DAP-Seq(GSE60143)/Homer	BCACCGACANNN	1e0	-0.000e+00	1.0000	18.0	4.04%	182.9	14.01%
SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer	TWCCAWWTWTGG	1e0	-0.000e+00	1.0000	5.0	1.12%	108.9	8.34%
DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer	SSTAATTA	1e0	-0.000e+00	1.0000	57.0	12.81%	353.5	27.07%
ERF73(AP2EREBP)/col-ERF73-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	-0.000e+00	1.0000	3.0	0.67%	93.3	7.15%
GATA11(C2C2gata)/col-GATA11-DAP-Seq(GSE60143)/Homer	DDHYYAGATCTR	1e0	-0.000e+00	1.0000	11.0	2.47%	147.0	11.25%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-0.000e+00	1.0000	1.0	0.22%	74.1	5.68%
LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer	NGCTAATTAG	1e0	-0.000e+00	1.0000	91.0	20.45%	482.3	36.94%
ANAC046(NAC)/colamp-ANAC046-DAP-Seq(GSE60143)/Homer	ACACGYWAYC	1e0	-0.000e+00	1.0000	130.0	29.21%	615.7	47.15%
ATHB21(HB)/colamp-ATHB21-DAP-Seq(GSE60143)/Homer	YCAATWAT	1e0	-0.000e+00	1.0000	19.0	4.27%	189.9	14.54%
ATAF1(NAC)/col-ATAF1-DAP-Seq(GSE60143)/Homer	YACGTMAY	1e0	-0.000e+00	1.0000	132.0	29.66%	756.1	57.90%
ANAC045(NAC)/col-ANAC045-DAP-Seq(GSE60143)/Homer	DNCKTVNNNNNNAMG	1e0	-0.000e+00	1.0000	97.0	21.80%	507.5	38.87%
En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer	NDCTAATTAS	1e0	-0.000e+00	1.0000	115.0	25.84%	584.1	44.73%
DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer	NNNTAATTAS	1e0	-0.000e+00	1.0000	101.0	22.70%	525.8	40.27%
MYB81(MYB)/col-MYB81-DAP-Seq(GSE60143)/Homer	NWAACSGWTWNN	1e0	-0.000e+00	1.0000	97.0	21.80%	567.8	43.48%
AT2G15740(C2H2)/col-AT2G15740-DAP-Seq(GSE60143)/Homer	DHNDWATCGATD	1e0	-0.000e+00	1.0000	36.0	8.09%	604.2	46.27%
DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer	NSNNTAATTA	1e0	-0.000e+00	1.0000	95.0	21.35%	517.6	39.63%
AtHB32(ZFHD)/col200-AtHB32-DAP-Seq(GSE60143)/Homer	CGAATTAT	1e0	-0.000e+00	1.0000	64.0	14.38%	532.1	40.75%
NAM(NAC)/col-NAM-DAP-Seq(GSE60143)/Homer	RGTTRCGTRW	1e0	-0.000e+00	1.0000	44.0	9.89%	556.9	42.65%
AT5G61620(MYBrelated)/colamp-AT5G61620-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e0	-0.000e+00	1.0000	64.0	14.38%	478.3	36.63%
NAP(NAC)/col-NAP-DAP-Seq(GSE60143)/Homer	ARGTTACGTRTN	1e0	-0.000e+00	1.0000	38.0	8.54%	509.6	39.02%
AT5G05550(Trihelix)/col-AT5G05550-DAP-Seq(GSE60143)/Homer	HDNHDTCKCCGGMGA	1e0	-0.000e+00	1.0000	50.0	11.24%	488.5	37.41%
MYB3R5(MYB)/col-MYB3R5-DAP-Seq(GSE60143)/Homer	THYAACGGTHAWAWT	1e0	-0.000e+00	1.0000	2.0	0.45%	85.2	6.53%
Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer	NHRTCACGACDN	1e0	-0.000e+00	1.0000	30.0	6.74%	486.0	37.22%
ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer	WTKRCGGCGB	1e0	-0.000e+00	1.0000	31.0	6.97%	475.6	36.42%
Knotted(Homeobox)/Corn-KN1-ChIP-Seq(GSE39161)/Homer	GAYGNGACRGGN	1e0	-0.000e+00	1.0000	67.0	15.06%	403.8	30.93%
MYB62(MYB)/colamp-MYB62-DAP-Seq(GSE60143)/Homer	NTACCTAACT	1e0	-0.000e+00	1.0000	39.0	8.76%	476.0	36.45%
At5g18450(AP2EREBP)/col-At5g18450-DAP-Seq(GSE60143)/Homer	CACCGCTT	1e0	-0.000e+00	1.0000	69.0	15.51%	425.2	32.56%
ATHB6(Homeobox)/col-ATHB6-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-0.000e+00	1.0000	40.0	8.99%	431.9	33.07%
SPL5(SBP)/colamp-SPL5-DAP-Seq(GSE60143)/Homer	NNHGTACGGHNN	1e0	-0.000e+00	1.0000	65.0	14.61%	416.5	31.90%
MYB88(MYB)/col-MYB88-DAP-Seq(GSE60143)/Homer	HNACGCTCCT	1e0	-0.000e+00	1.0000	35.0	7.87%	445.2	34.09%
AT5G56840(MYBrelated)/colamp-AT5G56840-DAP-Seq(GSE60143)/Homer	TGGATAAGGT	1e0	-0.000e+00	1.0000	44.0	9.89%	432.2	33.10%
At5g47390(MYBrelated)/col-At5g47390-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e0	-0.000e+00	1.0000	48.0	10.79%	421.3	32.26%
MYB107(MYB)/col-MYB107-DAP-Seq(GSE60143)/Homer	RGTWGGTRRR	1e0	-0.000e+00	1.0000	35.0	7.87%	429.2	32.87%
MYB83(MYB)/colamp-MYB83-DAP-Seq(GSE60143)/Homer	CACCAACCWH	1e0	-0.000e+00	1.0000	43.0	9.66%	430.8	32.99%
CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer	NRCCGACDWNNNNNN	1e0	-0.000e+00	1.0000	53.0	11.91%	345.2	26.43%
VND6(NAC)/col-VND6-DAP-Seq(GSE60143)/Homer	DCTTNHTTTTYAMGY	1e0	-0.000e+00	1.0000	53.0	11.91%	345.6	26.47%
TGA9(bZIP)/colamp-TGA9-DAP-Seq(GSE60143)/Homer	VTGACGTC	1e0	-0.000e+00	1.0000	56.0	12.58%	416.4	31.89%
bZIP50(bZIP)/colamp-bZIP50-DAP-Seq(GSE60143)/Homer	GATGACGTCA	1e0	-0.000e+00	1.0000	52.0	11.69%	400.7	30.69%
ANAC083(NAC)/col-ANAC083-DAP-Seq(GSE60143)/Homer	CKTRWNNNWYAMGTA	1e0	-0.000e+00	1.0000	37.0	8.31%	276.0	21.14%
AT1G77200(AP2EREBP)/colamp-AT1G77200-DAP-Seq(GSE60143)/Homer	ACCGACAHWD	1e0	-0.000e+00	1.0000	57.0	12.81%	368.1	28.19%
SeqBias: CG-repeat	CGCGCGCGCG	1e0	-0.000e+00	1.0000	44.0	9.89%	308.5	23.63%
HY5(bZIP)/colamp-HY5-DAP-Seq(GSE60143)/Homer	RRTSACGTSD	1e0	-0.000e+00	1.0000	36.0	8.09%	390.1	29.87%
MYB61(MYB)/colamp-MYB61-DAP-Seq(GSE60143)/Homer	HCYACCTACC	1e0	-0.000e+00	1.0000	35.0	7.87%	391.9	30.01%
ANAC047(NAC)/colamp-ANAC047-DAP-Seq(GSE60143)/Homer	WACACGTAACTT	1e0	-0.000e+00	1.0000	36.0	8.09%	394.2	30.19%
MYB56(MYB)/colamp-MYB56-DAP-Seq(GSE60143)/Homer	HTAACGRMHY	1e0	-0.000e+00	1.0000	25.0	5.62%	399.6	30.60%
ERF7(AP2EREBP)/col-ERF7-DAP-Seq(GSE60143)/Homer	ATGRCGGCGG	1e0	-0.000e+00	1.0000	37.0	8.31%	368.5	28.22%
CRF10(AP2EREBP)/col100-CRF10-DAP-Seq(GSE60143)/Homer	DCCGCCGYHA	1e0	-0.000e+00	1.0000	30.0	6.74%	387.1	29.64%
TATA-box/SacCer-Promoters/Homer	BBHWTATATA	1e0	-0.000e+00	1.0000	19.0	4.27%	191.3	14.65%
ESE3(AP2EREBP)/col-ESE3-DAP-Seq(GSE60143)/Homer	GACGGTGG	1e0	-0.000e+00	1.0000	26.0	5.84%	375.3	28.74%
ERF8(AP2EREBP)/colamp-ERF8-DAP-Seq(GSE60143)/Homer	CGCCGYCATW	1e0	-0.000e+00	1.0000	27.0	6.07%	370.7	28.39%
RAP26(AP2EREBP)/colamp-RAP26-DAP-Seq(GSE60143)/Homer	HDATGGCGGCGG	1e0	-0.000e+00	1.0000	24.0	5.39%	370.7	28.39%
ANAC070(NAC)/colamp-ANAC070-DAP-Seq(GSE60143)/Homer	CTTRHDNHNBAAGHW	1e0	-0.000e+00	1.0000	45.0	10.11%	341.4	26.15%
At4g16750(AP2EREBP)/col-At4g16750-DAP-Seq(GSE60143)/Homer	HACCGACAHA	1e0	-0.000e+00	1.0000	28.0	6.29%	355.9	27.26%
ERF15(AP2EREBP)/colamp-ERF15-DAP-Seq(GSE60143)/Homer	WDHAGCMGCCAT	1e0	-0.000e+00	1.0000	35.0	7.87%	348.3	26.67%
At5g08750(C3H)/col-At5g08750-DAP-Seq(GSE60143)/Homer	NWDTTGCGGCTR	1e0	-0.000e+00	1.0000	46.0	10.34%	343.1	26.27%
TCX2(CPP)/colamp-TCX2-DAP-Seq(GSE60143)/Homer	NNWWTTYRAAHN	1e0	-0.000e+00	1.0000	22.0	4.94%	367.6	28.15%
AT2G20110(CPP)/colamp-AT2G20110-DAP-Seq(GSE60143)/Homer	ATTYAAATHY	1e0	-0.000e+00	1.0000	20.0	4.49%	352.8	27.02%
SOL1(CPP)/colamp-SOL1-DAP-Seq(GSE60143)/Homer	ATTTAAATHN	1e0	-0.000e+00	1.0000	21.0	4.72%	348.6	26.70%
MYB55(MYB)/colamp-MYB55-DAP-Seq(GSE60143)/Homer	YACCWAMC	1e0	-0.000e+00	1.0000	23.0	5.17%	340.3	26.06%
CAMTA1(CAMTA)/col-CAMTA1-DAP-Seq(GSE60143)/Homer	WWAACGCGTT	1e0	-0.000e+00	1.0000	23.0	5.17%	336.0	25.73%
MYB93(MYB)/colamp-MYB93-DAP-Seq(GSE60143)/Homer	GGTAGGTGRD	1e0	-0.000e+00	1.0000	30.0	6.74%	311.3	23.84%
ERF4(AP2EREBP)/colamp-ERF4-DAP-Seq(GSE60143)/Homer	WDWTGGCGGCGG	1e0	-0.000e+00	1.0000	20.0	4.49%	327.4	25.07%
DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer	TAGCGCGC	1e0	-0.000e+00	1.0000	11.0	2.47%	335.0	25.65%
ANAC042(NAC)/col-ANAC042-DAP-Seq(GSE60143)/Homer	CGTNDHNDHNACGKY	1e0	-0.000e+00	1.0000	38.0	8.54%	293.3	22.46%
BOS1(MYB)/col-BOS1-DAP-Seq(GSE60143)/Homer	NNRCCTAACT	1e0	-0.000e+00	1.0000	22.0	4.94%	322.7	24.71%
ATHB5(HB)/colamp-ATHB5-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-0.000e+00	1.0000	39.0	8.76%	300.2	22.99%
MYB49(MYB)/col-MYB49-DAP-Seq(GSE60143)/Homer	ARKTAGGTRR	1e0	-0.000e+00	1.0000	26.0	5.84%	310.2	23.76%
ABR1(AP2EREBP)/colamp-ABR1-DAP-Seq(GSE60143)/Homer	AAATGGCGGCGG	1e0	-0.000e+00	1.0000	18.0	4.04%	313.1	23.98%
LBD13(LOBAS2)/colamp-LBD13-DAP-Seq(GSE60143)/Homer	KCCGTNWTTTBCGGC	1e0	-0.000e+00	1.0000	31.0	6.97%	297.8	22.80%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-0.000e+00	1.0000	16.0	3.60%	319.2	24.45%
CBF1(AP2EREBP)/colamp-CBF1-DAP-Seq(GSE60143)/Homer	YRCCGACATN	1e0	-0.000e+00	1.0000	17.0	3.82%	310.5	23.78%
AT4G26030(C2H2)/col-AT4G26030-DAP-Seq(GSE60143)/Homer	BYYACCWACY	1e0	-0.000e+00	1.0000	23.0	5.17%	295.9	22.66%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-0.000e+00	1.0000	13.0	2.92%	309.5	23.70%
At1g19000(MYBrelated)/colamp-At1g19000-DAP-Seq(GSE60143)/Homer	WWTGGATAADDT	1e0	-0.000e+00	1.0000	26.0	5.84%	298.0	22.82%
MYB4(MYB)/col200-MYB4-DAP-Seq(GSE60143)/Homer	WAGKTAGGTARR	1e0	-0.000e+00	1.0000	23.0	5.17%	214.9	16.46%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-0.000e+00	1.0000	24.0	5.39%	288.9	22.12%
HAT2(Homeobox)/colamp-HAT2-DAP-Seq(GSE60143)/Homer	CYAATSATTR	1e0	-0.000e+00	1.0000	22.0	4.94%	295.6	22.64%
MYB67(MYB)/col-MYB67-DAP-Seq(GSE60143)/Homer	YYYACCTAAC	1e0	-0.000e+00	1.0000	24.0	5.39%	293.1	22.45%
MYB99(MYB)/colamp-MYB99-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	-0.000e+00	1.0000	14.0	3.15%	291.8	22.34%
MYB58(MYB)/colamp-MYB58-DAP-Seq(GSE60143)/Homer	YYYACCWACC	1e0	-0.000e+00	1.0000	22.0	4.94%	287.4	22.01%
ATHB40(HB)/col-ATHB40-DAP-Seq(GSE60143)/Homer	HCAATWATTG	1e0	-0.000e+00	1.0000	32.0	7.19%	275.9	21.13%
TGA2(bZIP)/colamp-TGA2-DAP-Seq(GSE60143)/Homer	ACGTCAYCHH	1e0	-0.000e+00	1.0000	15.0	3.37%	283.2	21.69%
MYB30(MYB)/colamp-MYB30-DAP-Seq(GSE60143)/Homer	AGGTAGTTGG	1e0	-0.000e+00	1.0000	24.0	5.39%	268.3	20.55%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-0.000e+00	1.0000	30.0	6.74%	272.3	20.85%
Rap210(AP2EREBP)/col-Rap210-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	-0.000e+00	1.0000	17.0	3.82%	285.4	21.86%
At1g74840(MYBrelated)/col100-At1g74840-DAP-Seq(GSE60143)/Homer	YHTTATCCAWWT	1e0	-0.000e+00	1.0000	14.0	3.15%	276.9	21.20%
ATHB6(Homeobox)/Arabidopsis-HB6-ChIP-Seq(GSE80564)/Homer	CAATNATTBN	1e0	-0.000e+00	1.0000	27.0	6.07%	269.3	20.63%
MYB92(MYB)/colamp-MYB92-DAP-Seq(GSE60143)/Homer	GGTAGGTR	1e0	-0.000e+00	1.0000	26.0	5.84%	267.6	20.49%
bZIP52(bZIP)/colamp-bZIP52-DAP-Seq(GSE60143)/Homer	NDNHCAGCTGTCANN	1e0	-0.000e+00	1.0000	16.0	3.60%	277.2	21.23%
ATHB7(Homeobox)/col-ATHB7-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-0.000e+00	1.0000	23.0	5.17%	260.0	19.91%
MYB3R1(MYB)/col-MYB3R1-DAP-Seq(GSE60143)/Homer	WWDTDACCGTTR	1e0	-0.000e+00	1.0000	11.0	2.47%	266.4	20.40%
MYB113(MYB)/col-MYB113-DAP-Seq(GSE60143)/Homer	HNDAWTCMGTTAYWN	1e0	-0.000e+00	1.0000	27.0	6.07%	241.4	18.49%
NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer	VTTACGTAAYNNNNN	1e0	-0.000e+00	1.0000	11.0	2.47%	260.5	19.95%
ERF11(AP2EREBP)/col-ERF11-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e0	-0.000e+00	1.0000	12.0	2.70%	259.3	19.85%
ERF13(AP2EREBP)/colamp-ERF13-DAP-Seq(GSE60143)/Homer	TYAGCCGCCATT	1e0	-0.000e+00	1.0000	19.0	4.27%	252.9	19.37%
MS188(MYB)/colamp-MS188-DAP-Seq(GSE60143)/Homer	WARKTAGGTRRA	1e0	-0.000e+00	1.0000	19.0	4.27%	250.0	19.15%
MYB116(MYB)/colamp-MYB116-DAP-Seq(GSE60143)/Homer	AGTTAGGCAN	1e0	-0.000e+00	1.0000	10.0	2.25%	257.0	19.68%
AT3G60490(AP2EREBP)/colamp-AT3G60490-DAP-Seq(GSE60143)/Homer	NNRCCGACANNNNNN	1e0	-0.000e+00	1.0000	11.0	2.47%	150.5	11.52%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-0.000e+00	1.0000	16.0	3.60%	180.0	13.78%
CBF2(AP2EREBP)/colamp-CBF2-DAP-Seq(GSE60143)/Homer	YBRCCGACATNNNNN	1e0	-0.000e+00	1.0000	11.0	2.47%	251.4	19.25%
AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e0	-0.000e+00	1.0000	16.0	3.60%	242.9	18.60%
TGA6(bZIP)/colamp-TGA6-DAP-Seq(GSE60143)/Homer	TGACGTCABC	1e0	-0.000e+00	1.0000	10.0	2.25%	246.2	18.85%
CBF3(AP2EREBP)/colamp-CBF3-DAP-Seq(GSE60143)/Homer	YNRCCGACATNN	1e0	-0.000e+00	1.0000	8.0	1.80%	245.1	18.77%
AT4G00250(GeBP)/col-AT4G00250-DAP-Seq(GSE60143)/Homer	WDTGGATAAKRT	1e0	-0.000e+00	1.0000	16.0	3.60%	236.6	18.12%
MYB51(MYB)/col-MYB51-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	-0.000e+00	1.0000	15.0	3.37%	242.4	18.56%
ANAC094(NAC)/col-ANAC094-DAP-Seq(GSE60143)/Homer	DVCGTRNNNNNYACG	1e0	-0.000e+00	1.0000	19.0	4.27%	229.3	17.56%
DDF1(AP2EREBP)/col-DDF1-DAP-Seq(GSE60143)/Homer	GCCGACAT	1e0	-0.000e+00	1.0000	10.0	2.25%	238.9	18.30%
ERF38(AP2EREBP)/col-ERF38-DAP-Seq(GSE60143)/Homer	CACCGACA	1e0	-0.000e+00	1.0000	15.0	3.37%	226.9	17.38%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-0.000e+00	1.0000	10.0	2.25%	234.7	17.97%
bHLH80(bHLH)/col-bHLH80-DAP-Seq(GSE60143)/Homer	NNNNDCAASTTGHNN	1e0	-0.000e+00	1.0000	18.0	4.04%	229.3	17.56%
RAP212(AP2EREBP)/col-RAP212-DAP-Seq(GSE60143)/Homer	CGCCGCCATTTT	1e0	-0.000e+00	1.0000	19.0	4.27%	219.2	16.79%
ERF3(AP2EREBP)/colamp-ERF3-DAP-Seq(GSE60143)/Homer	ATGGCGGCGG	1e0	-0.000e+00	1.0000	15.0	3.37%	175.1	13.41%
ANAC079(NAC)/colamp-ANAC079-DAP-Seq(GSE60143)/Homer	TACACGCAACCT	1e0	-0.000e+00	1.0000	7.0	1.57%	228.4	17.49%
bHLH122(bHLH)/col100-bHLH122-DAP-Seq(GSE60143)/Homer	NDDCAASTTGHHNWW	1e0	-0.000e+00	1.0000	18.0	4.04%	214.3	16.41%
At1g76110(ARID)/colamp-At1g76110-DAP-Seq(GSE60143)/Homer	ATTTAATG	1e0	-0.000e+00	1.0000	18.0	4.04%	205.4	15.73%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-0.000e+00	1.0000	7.0	1.57%	224.5	17.19%
AGL63(MADS)/col-AGL63-DAP-Seq(GSE60143)/Homer	TTCCAAWWWTGG	1e0	-0.000e+00	1.0000	13.0	2.92%	217.4	16.65%
GATA12(C2C2gata)/col-GATA12-DAP-Seq(GSE60143)/Homer	YAGATCTRAW	1e0	-0.000e+00	1.0000	19.0	4.27%	209.7	16.06%
ATY19(MYB)/col-ATY19-DAP-Seq(GSE60143)/Homer	YYCACCWACCAT	1e0	-0.000e+00	1.0000	18.0	4.04%	206.6	15.82%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-0.000e+00	1.0000	5.0	1.12%	112.9	8.64%
AT3G16280(AP2EREBP)/colamp-AT3G16280-DAP-Seq(GSE60143)/Homer	HCACCGACAHHDHHN	1e0	-0.000e+00	1.0000	12.0	2.70%	207.9	15.92%
PUCHI(AP2EREBP)/colamp-PUCHI-DAP-Seq(GSE60143)/Homer	GCGCCGTY	1e0	-0.000e+00	1.0000	10.0	2.25%	205.5	15.73%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-0.000e+00	1.0000	8.0	1.80%	133.3	10.21%
HSF3(HSF)/colamp-HSF3-DAP-Seq(GSE60143)/Homer	NTTCTAGAAKCTTCT	1e0	-0.000e+00	1.0000	4.0	0.90%	213.4	16.34%
MYB57(MYB)/col-MYB57-DAP-Seq(GSE60143)/Homer	TTACCTAACT	1e0	-0.000e+00	1.0000	7.0	1.57%	205.0	15.70%
LBD2(LOBAS2)/colamp-LBD2-DAP-Seq(GSE60143)/Homer	TCCGAWTTTTTCGGN	1e0	-0.000e+00	1.0000	9.0	2.02%	205.3	15.72%
MYB74(MYB)/colamp-MYB74-DAP-Seq(GSE60143)/Homer	YYYACCTACCWH	1e0	-0.000e+00	1.0000	15.0	3.37%	183.0	14.01%
At4g31060(AP2EREBP)/colamp-At4g31060-DAP-Seq(GSE60143)/Homer	CACCGACAAW	1e0	-0.000e+00	1.0000	13.0	2.92%	196.8	15.07%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-0.000e+00	1.0000	11.0	2.47%	198.3	15.19%
ERF104(AP2EREBP)/col-ERF104-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-0.000e+00	1.0000	13.0	2.92%	192.5	14.74%
ABF1/SacCer-Promoters/Homer	CGTRNAAARTGA	1e0	-0.000e+00	1.0000	6.0	1.35%	200.1	15.32%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-0.000e+00	1.0000	13.0	2.92%	171.2	13.11%
DEAR3(AP2EREBP)/colamp-DEAR3-DAP-Seq(GSE60143)/Homer	BCACCGACAWNNNNN	1e0	-0.000e+00	1.0000	12.0	2.70%	165.2	12.65%
ERF10(AP2EREBP)/col-ERF10-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e0	-0.000e+00	1.0000	11.0	2.47%	161.9	12.40%
bHLH10(bHLH)/colamp-bHLH10-DAP-Seq(GSE60143)/Homer	YACCGACA	1e0	-0.000e+00	1.0000	10.0	2.25%	151.6	11.61%
PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer	ACTGATAAGA	1e0	-0.000e+00	1.0000	10.0	2.25%	152.6	11.69%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-0.000e+00	1.0000	9.0	2.02%	163.9	12.56%
SPL14(SBP)/col-SPL14-DAP-Seq(GSE60143)/Homer	NNWHTGTACGGAHNH	1e0	-0.000e+00	1.0000	10.0	2.25%	154.1	11.80%
HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer	TWVGGTCCGC	1e0	-0.000e+00	1.0000	5.0	1.12%	166.8	12.77%
Fos(bZIP)/TSC-Fos-ChIP-Seq(GSE110950)/Homer	NDATGASTCAYN	1e0	-0.000e+00	1.0000	9.0	2.02%	149.2	11.42%
FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer	HHCACGCGCBTN	1e0	-0.000e+00	1.0000	3.0	0.67%	166.5	12.75%
MYB3R4(MYB)/col-MYB3R4-DAP-Seq(GSE60143)/Homer	AWWTAACCGTTR	1e0	-0.000e+00	1.0000	6.0	1.35%	158.4	12.13%
AT3G10580(MYBrelated)/colamp-AT3G10580-DAP-Seq(GSE60143)/Homer	TACCTAACWNHW	1e0	-0.000e+00	1.0000	6.0	1.35%	162.5	12.45%
AT5G22990(C2H2)/col-AT5G22990-DAP-Seq(GSE60143)/Homer	WCGAHDTCGWHN	1e0	-0.000e+00	1.0000	2.0	0.45%	155.8	11.93%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-0.000e+00	1.0000	0.0	0.00%	2.6	0.20%
WRKY17(WRKY)/colamp-WRKY17-DAP-Seq(GSE60143)/Homer	GCGTTGACTTTT	1e0	-0.000e+00	1.0000	0.0	0.00%	2.1	0.16%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-0.000e+00	1.0000	3.0	0.67%	148.9	11.40%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e0	-0.000e+00	1.0000	7.0	1.57%	134.1	10.27%
Unknown3/Arabidopsis-Promoters/Homer	AYTAAACCGG	1e0	-0.000e+00	1.0000	7.0	1.57%	136.9	10.49%
HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer	TGATGGAW	1e0	-0.000e+00	1.0000	2.0	0.45%	90.3	6.91%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-0.000e+00	1.0000	0.0	0.00%	3.2	0.25%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-0.000e+00	1.0000	0.0	0.00%	3.5	0.27%
AT4G27900(C2C2COlike)/col-AT4G27900-DAP-Seq(GSE60143)/Homer	TCTCVACCGTTSATT	1e0	-0.000e+00	1.0000	0.0	0.00%	3.2	0.24%
HSFA6A(HSF)/col-HSFA6A-DAP-Seq(GSE60143)/Homer	RGAAGNTTCTAGAAN	1e0	-0.000e+00	1.0000	0.0	0.00%	3.7	0.28%
DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer	BCWGATTCAATCAAN	1e0	-0.000e+00	1.0000	0.0	0.00%	1.3	0.10%
ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer	RHHCAGAGAGGB	1e0	-0.000e+00	1.0000	0.0	0.00%	1.6	0.12%
bZIP42(bZIP)/colamp-bZIP42-DAP-Seq(GSE60143)/Homer	GCCACGTCAGCA	1e0	-0.000e+00	1.0000	0.0	0.00%	1.0	0.08%
LIN-15B(Zf)/cElegans-L3-LIN15B-ChIP-Seq(modEncode)/Homer	CARTGGAGCGCRYTTGCATT	1e0	-0.000e+00	1.0000	0.0	0.00%	1.7	0.13%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.6	0.05%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	0.7	0.05%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	0.2	0.02%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	1.0	0.08%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	0.6	0.05%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	0.3	0.02%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
AT1G10720(BSD)/col-AT1G10720-DAP-Seq(GSE60143)/Homer	TTCTAGAAKCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	0.9	0.07%
AT4G12670(MYBrelated)/col-AT4G12670-DAP-Seq(GSE60143)/Homer	AGGGTTTAGGGTTTA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
DEL1(E2FDP)/colamp-DEL1-DAP-Seq(GSE60143)/Homer	TTCCCGCCAA	1e0	0.000e+00	1.0000	0.0	0.00%	0.7	0.05%
REM16(ABI3VP1)/col-REM16-DAP-Seq(GSE60143)/Homer	DTTTTTSCCGSMAAA	1e0	0.000e+00	1.0000	0.0	0.00%	0.2	0.02%
WRKY7(WRKY)/colamp-WRKY7-DAP-Seq(GSE60143)/Homer	AAAAGTCAACGSHWD	1e0	0.000e+00	1.0000	0.0	0.00%	0.8	0.06%
GATA1(C2C2gata)/colamp-GATA1-DAP-Seq(GSE60143)/Homer	DDWWYYAGATCTRRW	1e0	0.000e+00	1.0000	6.0	1.35%	130.9	10.02%
Unknown6/Drosophila-Promoters/Homer	AATTTTAAAA	1e0	0.000e+00	1.0000	4.0	0.90%	136.1	10.42%
TGA1(bZIP)/colamp-TGA1-DAP-Seq(GSE60143)/Homer	TGACGTCAKC	1e0	0.000e+00	1.0000	3.0	0.67%	137.2	10.51%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	4.3	0.33%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	0.000e+00	1.0000	0.0	0.00%	4.5	0.35%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	4.8	0.37%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	4.5	0.34%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	4.8	0.37%
At1g13300(G2like)/col-At1g13300-DAP-Seq(GSE60143)/Homer	GAATCTWAGATTCYN	1e0	0.000e+00	1.0000	0.0	0.00%	4.1	0.31%
AT1G23810(Orphan)/col-AT1G23810-DAP-Seq(GSE60143)/Homer	TTCTAGAAGSTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	4.6	0.35%
TCP17(TCP)/col-TCP17-DAP-Seq(GSE60143)/Homer	GTGGTCCCCA	1e0	0.000e+00	1.0000	0.0	0.00%	4.9	0.38%
Unknown2/Arabidopsis-Promoters/Homer	AAACGACGTCGTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	4.8	0.37%
EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer	TGCAARYGCGCTCYA	1e0	0.000e+00	1.0000	0.0	0.00%	4.8	0.37%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	5.1	0.39%
RRTF1(AP2EREBP)/colamp-RRTF1-DAP-Seq(GSE60143)/Homer	CCGCCGCHATTT	1e0	0.000e+00	1.0000	3.0	0.67%	129.0	9.88%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	6.5	0.50%
HSFA1E(HSF)/col-HSFA1E-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	7.0	0.53%
WRKY30(WRKY)/colamp-WRKY30-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	0.000e+00	1.0000	4.0	0.90%	114.2	8.75%
At2g03500(G2like)/col-At2g03500-DAP-Seq(GSE60143)/Homer	WWAGAATATTCT	1e0	0.000e+00	1.0000	3.0	0.67%	102.2	7.83%
NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer	AWWWTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	7.1	0.54%
AGL25(MADS)/colamp-AGL25-DAP-Seq(GSE60143)/Homer	TTTCCATWTWTGGAA	1e0	0.000e+00	1.0000	0.0	0.00%	7.4	0.57%
HSFB3(HSF)/colamp-HSFB3-DAP-Seq(GSE60143)/Homer	TTCTAGAAGMTTHTW	1e0	0.000e+00	1.0000	0.0	0.00%	8.6	0.66%
TGA3(bZIP)/colamp-TGA3-DAP-Seq(GSE60143)/Homer	WTGATGACGTCATCW	1e0	0.000e+00	1.0000	0.0	0.00%	8.2	0.63%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	9.4	0.72%
HSFB4(HSF)/col-HSFB4-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	9.2	0.70%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	11.3	0.86%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	11.7	0.89%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	0.000e+00	1.0000	0.0	0.00%	11.6	0.89%
dHNF4(NR)/Fly-HNF4-ChIP-Seq(GSE73675)/Homer	GGTCCAAAGTCCAMT	1e0	0.000e+00	1.0000	0.0	0.00%	11.1	0.85%
HSFA6B(HSF)/colamp-HSFA6B-DAP-Seq(GSE60143)/Homer	NTTCTAGAANHTTCT	1e0	0.000e+00	1.0000	2.0	0.45%	102.4	7.84%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	0.000e+00	1.0000	1.0	0.22%	107.6	8.24%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	0.000e+00	1.0000	0.0	0.00%	12.2	0.93%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	12.0	0.92%
At5g22890(C2H2)/col-At5g22890-DAP-Seq(GSE60143)/Homer	NSAGGTKWTATCTGD	1e0	0.000e+00	1.0000	0.0	0.00%	12.8	0.98%
ZIM(C2C2gata)/col-ZIM-DAP-Seq(GSE60143)/Homer	ATCSRACGGTYRAGA	1e0	0.000e+00	1.0000	0.0	0.00%	12.0	0.92%
ZML1(C2C2gata)/colamp-ZML1-DAP-Seq(GSE60143)/Homer	ATCWYRACCGTTSRW	1e0	0.000e+00	1.0000	0.0	0.00%	12.8	0.98%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	0.000e+00	1.0000	0.0	0.00%	14.0	1.07%
ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer	GCACAYAGTAGGKCY	1e0	0.000e+00	1.0000	0.0	0.00%	13.7	1.05%
AGL13(MADS)/col-AGL13-DAP-Seq(GSE60143)/Homer	TWCCAWWTWTGGWAA	1e0	0.000e+00	1.0000	0.0	0.00%	13.2	1.01%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	0.000e+00	1.0000	0.0	0.00%	14.1	1.08%
TGA4(bZIP)/colamp-TGA4-DAP-Seq(GSE60143)/Homer	RTGACGTCAKCW	1e0	0.000e+00	1.0000	1.0	0.22%	100.0	7.65%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	0.000e+00	1.0000	0.0	0.00%	15.1	1.16%
MYB27(MYB)/colamp-MYB27-DAP-Seq(GSE60143)/Homer	TACCTAACWT	1e0	0.000e+00	1.0000	1.0	0.22%	85.3	6.53%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	0.000e+00	1.0000	0.0	0.00%	16.4	1.25%
AGL95(ND)/col-AGL95-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	16.4	1.26%
HSF21(HSF)/col-HSF21-DAP-Seq(GSE60143)/Homer	CTTCTAGAAGMTTYW	1e0	0.000e+00	1.0000	0.0	0.00%	17.0	1.30%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	0.000e+00	1.0000	0.0	0.00%	17.4	1.33%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	0.000e+00	1.0000	0.0	0.00%	18.9	1.45%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	0.000e+00	1.0000	0.0	0.00%	18.4	1.41%
AT3G09735(S1Falike)/col-AT3G09735-DAP-Seq(GSE60143)/Homer	TTCTAGAANMTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	87.5	6.70%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	0.000e+00	1.0000	0.0	0.00%	20.4	1.56%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	21.8	1.67%
TGA5(bZIP)/col-TGA5-DAP-Seq(GSE60143)/Homer	NNGATGACGTCATCN	1e0	0.000e+00	1.0000	0.0	0.00%	21.7	1.66%
AGL16(MADS)/col-AGL16-DAP-Seq(GSE60143)/Homer	TWCCHWATWDGGAAA	1e0	0.000e+00	1.0000	0.0	0.00%	23.2	1.78%
TSO1(CPP)/col-TSO1-DAP-Seq(GSE60143)/Homer	RAATTTRAAW	1e0	0.000e+00	1.0000	0.0	0.00%	26.5	2.03%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	0.000e+00	1.0000	0.0	0.00%	28.2	2.16%
AT2G01818(PLATZ)/col-AT2G01818-DAP-Seq(GSE60143)/Homer	TCTAGAABSTTC	1e0	0.000e+00	1.0000	0.0	0.00%	27.8	2.13%
bZIP69(bZIP)/col-bZIP69-DAP-Seq(GSE60143)/Homer	GACAGCTGKCAW	1e0	0.000e+00	1.0000	0.0	0.00%	27.3	2.09%
DREF/Drosophila-Promoters/Homer	AVYTATCGATAD	1e0	0.000e+00	1.0000	0.0	0.00%	30.2	2.31%
AS2(LOBAS2)/col-AS2-DAP-Seq(GSE60143)/Homer	CCGDAAWWHMCGSCG	1e0	0.000e+00	1.0000	0.0	0.00%	30.6	2.34%
HSFC1(HSF)/col-HSFC1-DAP-Seq(GSE60143)/Homer	HTTCTAGAADCTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	32.5	2.49%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	0.000e+00	1.0000	0.0	0.00%	31.2	2.39%
AARE(HLH)/mES-cMyc-ChIP-Seq/Homer	GATTGCATCA	1e0	0.000e+00	1.0000	0.0	0.00%	33.8	2.59%
SHN3(AP2EREBP)/col-SHN3-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	0.000e+00	1.0000	0.0	0.00%	33.8	2.59%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	0.000e+00	1.0000	0.0	0.00%	60.5	4.63%
BIM1(bHLH)/colamp-BIM1-DAP-Seq(GSE60143)/Homer	NNNNNNVTCACGTGM	1e0	0.000e+00	1.0000	0.0	0.00%	36.6	2.81%
HSF7(HSF)/colamp-HSF7-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	36.5	2.79%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	0.000e+00	1.0000	0.0	0.00%	41.5	3.18%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	0.000e+00	1.0000	0.0	0.00%	43.3	3.32%