Information for 11-AGGAGGATTAGT (Motif 11)

G T C A A C T G C T A G C G T A T C A G C T A G C T G A C A G T A G C T T G C A C T A G A G C T
Reverse Opposite:
C T G A A G T C A C G T C T G A G T C A A G C T G A T C A G T C C G A T A G T C A G T C C A G T
p-value:1e-31
log p-value:-7.239e+01
Information Content per bp:1.929
Number of Target Sequences with motif231.0
Percentage of Target Sequences with motif51.91%
Number of Background Sequences with motif57.9
Percentage of Background Sequences with motif14.49%
Average Position of motif in Targets425.0 +/- 62.8bp
Average Position of motif in Background4339096.5 +/- 4301384.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:AGGAGGATTAGT
AAGAGGATTAG-
 G T C A A C T G C T A G C G T A T C A G C T A G C T G A C A G T A G C T T G C A C T A G A G C T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGAGGATTAGT----
AGGGGGATTAGCTGCC
 G T C A A C T G C T A G C G T A T C A G C T A G C T G A C A G T A G C T T G C A C T A G A G C T A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

GSC2/MA0891.1/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:AGGAGGATTAGT
--GNGGATTAGN
 G T C A A C T G C T A G C G T A T C A G C T A G C T G A C A G T A G C T T G C A C T A G A G C T
A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

SF2(RRM)/Drosophila_melanogaster-RNCMPT00066-PBM/HughesRNA

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGAGGATTAGT
NGGAGGA-----
 G T C A A C T G C T A G C G T A T C A G C T A G C T G A C A G T A G C T T G C A C T A G A G C T
C T G A A C T G C T A G G C T A A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

bcd/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AGGAGGATTAGT--
---NGGATTAGNGG
 G T C A A C T G C T A G C G T A T C A G C T A G C T G A C A G T A G C T T G C A C T A G A G C T A C G T A C G T
A C G T A C G T A C G T T A C G C T A G C T A G G T C A A C G T A C G T C T G A T A C G A T C G A T C G A T C G

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AGGAGGATTAGT
--NNGGATTAGN
 G T C A A C T G C T A G C G T A T C A G C T A G C T G A C A G T A G C T T G C A C T A G A G C T
A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

OTX2/MA0712.2/Jaspar

Match Rank:7
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGGAGGATTAGT-
-AAGGGATTAGAA
 G T C A A C T G C T A G C G T A T C A G C T A G C T G A C A G T A G C T T G C A C T A G A G C T A C G T
A C G T G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

PITX1/MA0682.2/Jaspar

Match Rank:8
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AGGAGGATTAGT
---NGGATTAN-
 G T C A A C T G C T A G C G T A T C A G C T A G C T G A C A G T A G C T T G C A C T A G A G C T
A C G T A C G T A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AGGAGGATTAGT
--VRGGATTARN
 G T C A A C T G C T A G C G T A T C A G C T A G C T G A C A G T A G C T T G C A C T A G A G C T
A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:AGGAGGATTAGT
----GGATTAGC
 G T C A A C T G C T A G C G T A T C A G C T A G C T G A C A G T A G C T T G C A C T A G A G C T
A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C