Information for 12-ACTGTGTCTCTG (Motif 12)

C G T A A G T C A C G T A C T G A C G T A C T G G A C T A G T C A G C T G T A C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C T G A A C T G C T G A A G T C C G T A G T A C C G T A C T A G A C G T
p-value:1e-28
log p-value:-6.640e+01
Information Content per bp:1.862
Number of Target Sequences with motif351.0
Percentage of Target Sequences with motif78.88%
Number of Background Sequences with motif165.7
Percentage of Background Sequences with motif41.47%
Average Position of motif in Targets378.6 +/- 378.7bp
Average Position of motif in Background3413912.9 +/- 4514582.9bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nv_0278(RRM)/Nematostella_vectensis-RNCMPT00278-PBM/HughesRNA

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ACTGTGTCTCTG
-NTGTGTCT---
 C G T A A G T C A C G T A C T G A C G T A C T G G A C T A G T C A G C T G T A C A C G T A C T G
A C G T G T C A A C G T T A C G A C G T C T A G A C G T A T G C A C G T A C G T A C G T A C G T

HMRA1/MA0327.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACTGTGTCTCTG
ATTGTGC-----
 C G T A A G T C A C G T A C T G A C G T A C T G G A C T A G T C A G C T G T A C A C G T A C T G
C G T A A C G T A C G T A C T G A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

MATA1(MacIsaac)/Yeast

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACTGTGTCTCTG
ATTGTGC-----
 C G T A A G T C A C G T A C T G A C G T A C T G G A C T A G T C A G C T G T A C A C G T A C T G
C G T A A C G T A C G T A C T G A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

SeqBias: CA-repeat

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACTGTGTCTCTG
--TGTGTGTGTG
 C G T A A G T C A C G T A C T G A C G T A C T G G A C T A G T C A G C T G T A C A C G T A C T G
A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C T G

CNOT4(RRM)/Homo_sapiens-RNCMPT00156-PBM/HughesRNA

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACTGTGTCTCTG
-NTCTGTC----
 C G T A A G T C A C G T A C T G A C G T A C T G G A C T A G T C A G C T G T A C A C G T A C T G
A C G T G C T A A C G T A T G C A C G T A T C G A C G T A T G C A C G T A C G T A C G T A C G T

SM(RRM)/Drosophila_melanogaster-RNCMPT00069-PBM/HughesRNA

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACTGTGTCTCTG
--TGTGTGT---
 C G T A A G T C A C G T A C T G A C G T A C T G G A C T A G T C A G C T G T A C A C G T A C T G
A C G T A C G T A C G T A C T G A G C T A C T G A C G T T A C G A C G T A C G T A C G T A C G T

CUP9/MA0288.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACTGTGTCTCTG
AATGTGTCA---
 C G T A A G T C A C G T A C T G A C G T A C T G G A C T A G T C A G C T G T A C A C G T A C T G
C G T A C G T A C A G T T C A G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

Dmrt1/MA1603.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACTGTGTCTCTG
GNTACTTTGTATC--
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T A C T G G A C T A G T C A G C T G T A C A C G T A C T G
C A T G G C T A G C A T G C T A G A T C G C A T C G A T C G A T C T A G G C A T C G T A C G A T G A T C A C G T A C G T

SGR5(C2H2)/colamp-SGR5-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACTGTGTCTCTG--
--TTTGTCTTTTTT
 C G T A A G T C A C G T A C T G A C G T A C T G G A C T A G T C A G C T G T A C A C G T A C T G A C G T A C G T
A C G T A C G T G A C T A C G T A C G T A C T G A C G T A G T C G C A T A G C T G C A T G C A T G A C T A G C T

MET32(MacIsaac)/Yeast

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACTGTGTCTCTG
AAACTGTGGC----
 A C G T A C G T C G T A A G T C A C G T A C T G A C G T A C T G G A C T A G T C A G C T G T A C A C G T A C T G
G T C A C G T A C T G A A T G C A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T