Information for 13-CMCTGAGATGYT (Motif 13)

A G T C G T C A A G T C A G C T A C T G C G T A A C T G C G T A A G C T C T A G A G T C A C G T
Reverse Opposite:
C G T A T C A G A G T C C T G A A C G T A G T C A C G T A G T C C T G A C T A G C A G T A C T G
p-value:1e-27
log p-value:-6.436e+01
Information Content per bp:1.879
Number of Target Sequences with motif326.0
Percentage of Target Sequences with motif73.26%
Number of Background Sequences with motif143.0
Percentage of Background Sequences with motif35.79%
Average Position of motif in Targets340.5 +/- 262.3bp
Average Position of motif in Background3230842.2 +/- 4144289.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YBX1(CSD)/Homo_sapiens-RNCMPT00083-PBM/HughesRNA

Match Rank:1
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:CMCTGAGATGYT
-----TGATGTT
 A G T C G T C A A G T C A G C T A C T G C G T A A C T G C G T A A G C T C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C T G A A C G T A C T G A C G T A C G T

YBX1(CSD)/Homo_sapiens-RNCMPT00116-PBM/HughesRNA

Match Rank:2
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CMCTGAGATGYT
-----TGATGTT
 A G T C G T C A A G T C A G C T A C T G C G T A A C T G C G T A A G C T C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C T G C T G A A C G T A C T G A C G T A C G T

YBX2(CSD)/Homo_sapiens-RNCMPT00084-PBM/HughesRNA

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CMCTGAGATGYT
-----NGTTGTT
 A G T C G T C A A G T C A G C T A C T G C G T A A C T G C G T A A G C T C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G G C A T A C G T A T C G A G C T A G C T

Tal1

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CMCTGAGATGYT
----CAGATG--
 A G T C G T C A A G T C A G C T A C T G C G T A A C T G C G T A A G C T C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C G T A C G T

ARR10/MA0121.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CMCTGAGATGYT-
-----AGATCCGC
 A G T C G T C A A G T C A G C T A C T G C G T A A C T G C G T A A G C T C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A C T G C T G A A C G T G A T C G A T C A C T G T A G C

Ptf1a/MA1618.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CMCTGAGATGYT--
-AAACAGATGTTTA
 A G T C G T C A A G T C A G C T A C T G C G T A A C T G C G T A A G C T C T A G A G T C A C G T A C G T A C G T
A C G T C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A

CHA4(MacIsaac)/Yeast

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CMCTGAGATGYT
---TGCGATGAG
 A G T C G T C A A G T C A G C T A C T G C G T A A C T G C G T A A G C T C T A G A G T C A C G T
A C G T A C G T A C G T G C A T T C A G G T A C C T A G C T G A A G C T T A C G G T C A C T A G

PDR8/MA0354.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CMCTGAGATGYT
-ACGGAGAT---
 A G T C G T C A A G T C A G C T A C T G C G T A A C T G C G T A A G C T C T A G A G T C A C G T
A C G T T C A G A G T C A C T G A C T G C G T A T A C G C G T A C G A T A C G T A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CMCTGAGATGYT
--TCCAGATGTT
 A G T C G T C A A G T C A G C T A C T G C G T A A C T G C G T A A G C T C T A G A G T C A C G T
A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CMCTGAGATGYT
-CTTGAGTGGCT
 A G T C G T C A A G T C A G C T A C T G C G T A A C T G C G T A A G C T C T A G A G T C A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T