Information for 19-GGACCTCTGCCC (Motif 19)

C T A G A C T G C G T A G T A C G T A C A C G T A G T C A C G T C T A G A G T C G A T C A T G C
Reverse Opposite:
A T C G C T A G T C A G A G T C C G T A C T A G C G T A A C T G C A T G A C G T G T A C A G T C
p-value:1e-21
log p-value:-4.995e+01
Information Content per bp:1.969
Number of Target Sequences with motif227.0
Percentage of Target Sequences with motif51.01%
Number of Background Sequences with motif77.4
Percentage of Background Sequences with motif19.37%
Average Position of motif in Targets299.2 +/- 48.0bp
Average Position of motif in Background3552734.8 +/- 4482517.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GGACCTCTGCCC--
TGACCTTTGCCCTA
 C T A G A C T G C G T A G T A C G T A C A C G T A G T C A C G T C T A G A G T C G A T C A T G C A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GGACCTCTGCCC--
TGACCTTTGCCCCA
 C T A G A C T G C G T A G T A C G T A C A C G T A G T C A C G T C T A G A G T C G A T C A T G C A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GGACCTCTGCCC---
TGACCTTTGCCCTAN
 C T A G A C T G C G T A G T A C G T A C A C G T A G T C A C G T C T A G A G T C G A T C A T G C A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GGACCTCTGCCC---
TGACCTCTGACCCCN
 C T A G A C T G C G T A G T A C G T A C A C G T A G T C A C G T C T A G A G T C G A T C A T G C A C G T A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GGACCTCTGCCC---
TGACCTTTGMCCTNB
 C T A G A C T G C G T A G T A C G T A C A C G T A G T C A C G T C T A G A G T C G A T C A T G C A C G T A C G T A C G T
G C A T T C A G T G C A G T A C G A T C A G C T A G C T A C G T T A C G T G C A G A T C G A T C G A C T G C T A A C T G

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGACCTCTGCCC--
TGACCTTTGACCTC
 C T A G A C T G C G T A G T A C G T A C A C G T A G T C A C G T C T A G A G T C G A T C A T G C A C G T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGACCTCTGCCC--
NTGACCTTTGACCTN
 A C G T C T A G A C T G C G T A G T A C G T A C A C G T A G T C A C G T C T A G A G T C G A T C A T G C A C G T A C G T
C A T G G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

Nr2f6/MA0677.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGACCTCTGCCC--
TGACCTTTGACCTN
 C T A G A C T G C G T A G T A C G T A C A C G T A G T C A C G T C T A G A G T C G A T C A T G C A C G T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

PPARA::RXRA/MA1148.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGACCTCTGCCC-----
NTGACCTTTGACCTANAT
 A C G T C T A G A C T G C G T A G T A C G T A C A C G T A G T C A C G T C T A G A G T C G A T C A T G C A C G T A C G T A C G T A C G T A C G T
T G C A G A C T T C A G T G C A G T A C A G T C A G C T G A C T G A C T T C A G T G C A G A T C G T A C A G C T T G C A A G T C C G T A C G A T

THRB/MA1574.1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGACCTCTGCCC--
NTGACCTTTGACCCC
 A C G T C T A G A C T G C G T A G T A C G T A C A C G T A G T C A C G T C T A G A G T C G A T C A T G C A C G T A C G T
T C G A G A C T T C A G T G C A G T A C G T A C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C