Information for 20-AAAGWCMTBRCC (Motif 20)

T G C A G C T A C T G A A C T G C G A T T A G C G T A C A C G T A T C G C T G A T A G C T G A C
Reverse Opposite:
A C T G A T C G G A C T T A G C T G C A C A T G A T C G G C T A T G A C G A C T C G A T A C G T
p-value:1e-21
log p-value:-4.838e+01
Information Content per bp:1.593
Number of Target Sequences with motif272.0
Percentage of Target Sequences with motif61.12%
Number of Background Sequences with motif114.4
Percentage of Background Sequences with motif28.64%
Average Position of motif in Targets294.6 +/- 82.9bp
Average Position of motif in Background3042663.2 +/- 4179767.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARG(var.3)/MA1553.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAGWCMTBRCC--
AAGGTCATGACCTT
 T G C A G C T A C T G A A C T G C G A T T A G C G T A C A C G T A T C G C T G A T A G C T G A C A C G T A C G T
C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A C T T C A G G C T A G T A C G T A C A G C T G A C T

RARB(var.3)/MA1552.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAGWCMTBRCC--
AAGGTCATGACCTT
 T G C A G C T A C T G A A C T G C G A T T A G C G T A C A C G T A T C G C T G A T A G C T G A C A C G T A C G T
C T G A T C G A A C T G C A T G A G C T A G T C C T G A G A C T T C A G T G C A G T A C G A T C A G C T G A C T

Dof3/MA0021.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAAGWCMTBRCC
AAAGCG------
 T G C A G C T A C T G A A C T G C G A T T A G C G T A C A C G T A T C G C T G A T A G C T G A C
C G T A C G T A C G T A A C T G A G T C T A C G A C G T A C G T A C G T A C G T A C G T A C G T

DOF2.4/MA0982.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAAGWCMTBRCC
AAAAAGT-------
 A C G T A C G T T G C A G C T A C T G A A C T G C G A T T A G C G T A C A C G T A T C G C T G A T A G C T G A C
C T G A C G T A G C T A G C T A G T C A C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DOF5.6/MA0983.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAGWCMTBRCC
GAAAAAGT-------
 A C G T A C G T A C G T T G C A G C T A C T G A A C T G C G A T T A G C G T A C A C G T A T C G C T G A T A G C T G A C
T A C G C G T A C G T A G T C A G T C A T G C A C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PHYPADRAFT_140773/MA0987.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAGWCMTBRCC
CAAAAAGTAA-----
 A C G T A C G T A C G T T G C A G C T A C T G A A C T G C G A T T A G C G T A C A C G T A T C G C T G A T A G C T G A C
T A G C C T G A C G T A G C T A G C T A G T C A C T A G A G C T C T A G C T G A A C G T A C G T A C G T A C G T A C G T

DOF5.3/MA1071.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAGWCMTBRCC
GAAAAAG--------
 A C G T A C G T A C G T T G C A G C T A C T G A A C T G C G A T T A G C G T A C A C G T A T C G C T G A T A G C T G A C
T A C G C G T A C G T A G C T A G T C A G T C A C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBF/MA0064.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAAGWCMTBRCC
AAAGC-------
 T G C A G C T A C T G A A C T G C G A T T A G C G T A C A C G T A T C G C T G A T A G C T G A C
C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MNB1A/MA0053.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAGWCMTBRCC
AAAGC-------
 T G C A G C T A C T G A A C T G C G A T T A G C G T A C A C G T A T C G C T G A T A G C T G A C
C G T A C G T A C G T A A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAAGWCMTBRCC--
GAGGTCATGACCTC
 T G C A G C T A C T G A A C T G C G A T T A G C G T A C A C G T A T C G C T G A T A G C T G A C A C G T A C G T
T C A G T C G A A T C G C A T G C A G T A G T C C T G A A C G T T C A G G T C A T G A C A T G C A G C T A G T C