Information for 22-AATCRRGTTTTA (Motif 22)

C T G A G T C A C A G T T A G C T C A G C T G A T C A G C A G T C G A T A C G T G A C T C T G A
Reverse Opposite:
A G C T C T G A C G T A G C T A G T C A A G T C G A C T A G T C A T C G G C T A C A G T A G C T
p-value:1e-17
log p-value:-4.090e+01
Information Content per bp:1.715
Number of Target Sequences with motif294.0
Percentage of Target Sequences with motif66.07%
Number of Background Sequences with motif144.6
Percentage of Background Sequences with motif36.20%
Average Position of motif in Targets304.2 +/- 174.8bp
Average Position of motif in Background3800584.2 +/- 4561126.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SIX2/MA1119.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AATCRRGTTTTA---
GTATCAGGTTTCAGNN
 A C G T C T G A G T C A C A G T T A G C T C A G C T G A T C A G C A G T C G A T A C G T G A C T C T G A A C G T A C G T A C G T
C T A G C A G T T G C A G C A T G A T C C G T A C A T G C T A G G A C T C A G T C G A T G T A C G C T A A C T G C G A T C G A T

TRP2(MYBrelated)/colamp-TRP2-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AATCRRGTTTTA
----AGGGTTTA
 C T G A G T C A C A G T T A G C T C A G C T G A T C A G C A G T C G A T A C G T G A C T C T G A
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C T A G A C G T A C G T A C G T C G T A

abd-B/dmmpmm(Noyes)/fly

Match Rank:3
Score:0.65
Offset:6
Orientation:forward strand
Alignment:AATCRRGTTTTA---
------GTTTTATGA
 C T G A G T C A C A G T T A G C T C A G C T G A T C A G C A G T C G A T A C G T G A C T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G A T C G A T A C G T C G A T C G T A A G C T C A T G C T G A

Abd-B/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.64
Offset:6
Orientation:forward strand
Alignment:AATCRRGTTTTA----
------GTTTTATGAC
 C T G A G T C A C A G T T A G C T C A G C T G A T C A G C A G T C G A T A C G T G A C T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G A T C G A T A C G T C G A T C G T A A G C T C A T G C T G A A G T C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AATCRRGTTTTA-----
-----DGWTTTATGRCN
 C T G A G T C A C A G T T A G C T C A G C T G A T C A G C A G T C G A T A C G T G A C T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

croc/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:AATCRRGTTTTA-
-------TTTTAT
 C T G A G T C A C A G T T A G C T C A G C T G A T C A G C A G T C G A T A C G T G A C T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T

br-Z3/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AATCRRGTTTTA
--ACAAGTTTA-
 C T G A G T C A C A G T T A G C T C A G C T G A T C A G C A G T C G A T A C G T G A C T C T G A
A C G T A C G T C G A T A G C T C G A T C G A T A C T G A C G T A C G T A C G T C G A T A C G T

AT1G76870(Trihelix)/col-AT1G76870-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AATCRRGTTTTA
-WWCYGGTTTT-
 C T G A G T C A C A G T T A G C T C A G C T G A T C A G C A G T C G A T A C G T G A C T C T G A
A C G T C G A T G C T A T A G C A G T C A C T G A C T G C G A T C G A T C G A T G C A T A C G T

KHDRBS2(KH)/Homo_sapiens-RNCMPT00185-PBM/HughesRNA

Match Rank:9
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:AATCRRGTTTTA--
-------TTTTATC
 C T G A G T C A C A G T T A G C T C A G C T G A T C A G C A G T C G A T A C G T G A C T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T A C G T C G A T C T G A A C G T A G T C

KHDRBS1(KH)/Homo_sapiens-RNCMPT00169-PBM/HughesRNA

Match Rank:10
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:AATCRRGTTTTA-
------CTTTTAT
 C T G A G T C A C A G T T A G C T C A G C T G A T C A G C A G T C G A T A C G T G A C T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G A T A C G T C G A T C G T A C G A T