Information for 10-GATAGGAGAA (Motif 24)

A C T G C G T A A C G T C G T A A C T G A C T G G T C A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C G T A G T C
p-value:1e-11
log p-value:-2.575e+01
Information Content per bp:1.987
Number of Target Sequences with motif244.0
Percentage of Target Sequences with motif54.83%
Number of Background Sequences with motif126.3
Percentage of Background Sequences with motif31.61%
Average Position of motif in Targets541.0 +/- 75.2bp
Average Position of motif in Background2974176.4 +/- 4312067.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN28A(CSD,Znf)/Homo_sapiens-RNCMPT00036-PBM/HughesRNA

Match Rank:1
Score:0.77
Offset:3
Orientation:forward strand
Alignment:GATAGGAGAA
---NGGAGAA
 A C T G C G T A A C G T C G T A A C T G A C T G G T C A A C T G C G T A C G T A
A C G T A C G T A C G T G T A C A C T G A C T G C G T A A C T G C G T A C T G A

SRSF2(RRM)/Homo_sapiens-RNCMPT00072-PBM/HughesRNA

Match Rank:2
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GATAGGAGAA-
---AGGAGANG
 A C T G C G T A A C G T C G T A A C T G A C T G G T C A A C T G C G T A C G T A A C G T
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C T A G C T A G

SRSF9(RRM)/Homo_sapiens-RNCMPT00074-PBM/HughesRNA

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GATAGGAGAA
---AGGAGCA
 A C T G C G T A A C G T C G T A A C T G A C T G G T C A A C T G C G T A C G T A
A C G T A C G T A C G T C G T A C A T G C T A G C G T A T A C G G T A C C T G A

GLN3/GLN3_RAPA/8-GZF3,11-GLN3(Harbison)/Yeast

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GATAGGAGAA
GATAAGATA-
 A C T G C G T A A C G T C G T A A C T G A C T G G T C A A C T G C G T A C G T A
T A C G T C G A G A C T C G T A C T G A T A C G T G C A C G A T C T G A A C G T

Mecom/MA0029.1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GATAGGAGAA--
AAGATAAGATAACA
 A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G G T C A A C T G C G T A C G T A A C G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

DAL82/DAL82_SM/3-DAL82(Harbison)/Yeast

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GATAGGAGAA
GATAAGA---
 A C T G C G T A A C G T C G T A A C T G A C T G G T C A A C T G C G T A C G T A
A C T G T C G A A C G T T G C A C T G A A T C G T C G A A C G T A C G T A C G T

ttk/MA0460.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GATAGGAGAA-
--AAGGATAAT
 A C T G C G T A A C G T C G T A A C T G A C T G G T C A A C T G C G T A C G T A A C G T
A C G T A C G T T G C A C G T A A C T G A C T G C G T A A G C T C G T A C G T A A G C T

FZF1/MA0298.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GATAGGAGAA
TGATAG-----
 A C G T A C T G C G T A A C G T C G T A A C T G A C T G G T C A A C T G C G T A C G T A
A C G T A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T

GATA6/MA1104.2/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GATAGGAGAA
NNAGATAAGATAN
 A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G G T C A A C T G C G T A C G T A
C G T A C T G A C G T A C T A G C G T A G C A T C G T A C G T A T A C G T C G A C G A T C G T A C G T A

GLN3(MacIsaac)/Yeast

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GATAGGAGAA
AGATAAGATA-
 A C G T A C T G C G T A A C G T C G T A A C T G A C T G G T C A A C T G C G T A C G T A
G T C A T C A G T C G A A G C T C T G A C T G A A C T G T C G A G C A T T C G A A C G T