Information for 24-AAGRGGAAGRCC (Motif 26)

T C G A G C T A C T A G T C A G C T A G C T A G T G C A G T C A A C T G C T G A A G T C T G A C
Reverse Opposite:
A C T G C T A G G A C T G T A C C A G T A C G T A G T C G A T C A G T C A G T C C G A T A G C T
p-value:1e-9
log p-value:-2.082e+01
Information Content per bp:1.727
Number of Target Sequences with motif190.0
Percentage of Target Sequences with motif42.70%
Number of Background Sequences with motif92.3
Percentage of Background Sequences with motif23.10%
Average Position of motif in Targets447.1 +/- 64.8bp
Average Position of motif in Background2450322.7 +/- 3972587.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCR1(MacIsaac)/Yeast

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:AAGRGGAAGRCC
---TGGAAGCCC
 T C G A G C T A C T A G T C A G C T A G C T A G T G C A G T C A A C T G C T G A A G T C T G A C
A C G T A C G T A C G T C G A T A C T G C T A G C G T A C G T A A C T G G A T C T G A C T A G C

GCR1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AAGRGGAAGRCC
--GAGGAAGCC-
 T C G A G C T A C T A G T C A G C T A G C T A G T G C A G T C A A C T G C T G A A G T C T G A C
A C G T A C G T A C T G C G A T A C T G A C T G C G T A C G T A A C T G A G T C A G T C A C G T

SPIC/MA0687.1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAGRGGAAGRCC
AAAAAGAGGAAGTA-
 A C G T A C G T A C G T T C G A G C T A C T A G T C A G C T A G C T A G T G C A G T C A A C T G C T G A A G T C T G A C
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A A C G T

RO3G_00049(RRM)/Rhizopus_oryzae-RNCMPT00205-PBM/HughesRNA

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AAGRGGAAGRCC
-AGGGGAA----
 T C G A G C T A C T A G T C A G C T A G C T A G T G C A G T C A A C T G C T G A A G T C T G A C
A C G T C T G A C A T G A C T G A C T G A C T G C T G A C G T A A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAGRGGAAGRCC
TTAAGAGGAAGTTA
 A C G T A C G T T C G A G C T A C T A G T C A G C T A G C T A G T G C A G T C A A C T G C T G A A G T C T G A C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

GCR1/MA0304.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AAGRGGAAGRCC
---TGGAAGCC-
 T C G A G C T A C T A G T C A G C T A G C T A G T G C A G T C A A C T G C T G A A G T C T G A C
A C G T A C G T A C G T C G A T A T C G A T C G C G T A G C T A A C T G G T A C A G T C A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGRGGAAGRCC
AAAGRGGAAGTG-
 A C G T T C G A G C T A C T A G T C A G C T A G C T A G T G C A G T C A A C T G C T G A A G T C T G A C
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T

IKZF1/MA1508.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAGRGGAAGRCC
GAAACAGGAAGT--
 A C G T A C G T T C G A G C T A C T A G T C A G C T A G C T A G T G C A G T C A A C T G C T G A A G T C T G A C
T C A G T C G A T G C A T C G A T A G C C G T A C T A G T C A G T C G A C G T A T C A G A G C T A C G T A C G T

SPI1/MA0080.5/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AAGRGGAAGRCC----
AAAAAAGAGGAAGTGAAAAA
 A C G T A C G T A C G T A C G T T C G A G C T A C T A G T C A G C T A G C T A G T G C A G T C A A C T G C T G A A G T C T G A C A C G T A C G T A C G T A C G T
C T G A C T G A C T G A C T G A C T G A C G T A T C A G C T G A C T A G C T A G T C G A C G T A T C A G C G A T T A C G T C G A C T G A C T G A C T G A C G T A

Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAGRGGAAGRCC
AMCMGGAAGT--
 T C G A G C T A C T A G T C A G C T A G C T A G T G C A G T C A A C T G C T G A A G T C T G A C
C G T A G T C A T A G C T G C A A C T G T A C G T C G A G C T A T C A G G A C T A C G T A C G T