Information for 20-GTACAGGTCA (Motif 30)

A C T G A C G T C G T A G T A C G T C A C T A G A C T G A C G T A G T C C G T A
Reverse Opposite:
C G A T A C T G C G T A A G T C A G T C A C G T A C T G A C G T C G T A A G T C
p-value:1e-1
log p-value:-3.972e+00
Information Content per bp:1.931
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif16.18%
Number of Background Sequences with motif44.8
Percentage of Background Sequences with motif11.20%
Average Position of motif in Targets76.2 +/- 1.6bp
Average Position of motif in Background4088025.8 +/- 4188171.6bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP911(2)(bZIP)/Antirrhinum majus/AthaMap

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GTACAGGTCA--
GTACACGTCATC
 A C T G A C G T C G T A G T A C G T C A C T A G A C T G A C G T A G T C C G T A A C G T A C G T
A C T G A C G T C G T A A G T C C G T A A G T C A C T G A C G T A G T C C G T A A G C T A G T C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GTACAGGTCA
ANGNAAAGGTCA
 A C G T A C G T A C T G A C G T C G T A G T A C G T C A C T A G A C T G A C G T A G T C C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

NR4A1/MA1112.2/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GTACAGGTCA--
TTAAAGGTCAAA
 A C T G A C G T C G T A G T A C G T C A C T A G A C T G A C G T A G T C C G T A A C G T A C G T
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GTACAGGTCA----
TCTCAAAGGTCACGAG
 A C G T A C G T A C T G A C G T C G T A G T A C G T C A C T A G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

nhr-6/MA1451.1/Jaspar

Match Rank:5
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GTACAGGTCA
--AAAGGTCA
 A C T G A C G T C G T A G T A C G T C A C T A G A C T G A C G T A G T C C G T A
A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

NR2F2/MA1111.1/Jaspar

Match Rank:6
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GTACAGGTCA--
-CAAAGGTCAAA
 A C T G A C G T C G T A G T A C G T C A C T A G A C T G A C G T A G T C C G T A A C G T A C G T
A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GTACAGGTCA----
TCTCAAAGGTCACCTG
 A C G T A C G T A C T G A C G T C G T A G T A C G T C A C T A G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.72
Offset:4
Orientation:forward strand
Alignment:GTACAGGTCA
----AGGTCA
 A C T G A C G T C G T A G T A C G T C A C T A G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTACAGGTCA
ATCAAGGTCA
 A C T G A C G T C G T A G T A C G T C A C T A G A C T G A C G T A G T C C G T A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GTACAGGTCA
--TRAGGTCA
 A C T G A C G T C G T A G T A C G T C A C T A G A C T G A C G T A G T C C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A