Information for 1-CTATGTAG (Motif 31)

A G T C A C G T C G T A A G C T A C T G A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A G T C C T G A A C G T C G T A A C T G
p-value:1e0
log p-value:-3.772e-02
Information Content per bp:1.981
Number of Target Sequences with motif253.0
Percentage of Target Sequences with motif56.85%
Number of Background Sequences with motif250.2
Percentage of Background Sequences with motif62.63%
Average Position of motif in Targets40.1 +/- 4.1bp
Average Position of motif in Background3790846.4 +/- 4156482.9bp
Strand Bias (log2 ratio + to - strand density)5.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hrp1p(RRM)/Saccharomyces_cerevisiae-RNCMPT00031-PBM/HughesRNA

Match Rank:1
Score:0.84
Offset:1
Orientation:forward strand
Alignment:CTATGTAG
-TATGTAG
 A G T C A C G T C G T A A G C T A C T G A C G T C G T A A C T G
A C G T A C G T C G T A A G C T C T A G A C G T C G T A T C A G

MAL8P1.40(RRM)/Plasmodium_falciparum-RNCMPT00197-PBM/HughesRNA

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTATGTAG
-CATGTAT
 A G T C A C G T C G T A A G C T A C T G A C G T C G T A A C T G
A C G T A G T C C G T A A C G T C T A G A C G T C G T A C G A T

br-Z2/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTATGTAG
CTATTTA-
 A G T C A C G T C G T A A G C T A C T G A C G T C G T A A C T G
A G T C A C G T C G T A C G A T C G A T G C A T C G T A A C G T

br-Z2/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTATGTAG
TCTATTAA-
 A C G T A G T C A C G T C G T A A G C T A C T G A C G T C G T A A C T G
G C A T A T G C A C G T C G T A C A G T A C G T C G T A G C T A A C G T

YAP6(MacIsaac)/Yeast

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTATGTAG
TTATGTAA
 A G T C A C G T C G T A A G C T A C T G A C G T C G T A A C T G
C A G T C G A T T C G A G A C T T C A G G A C T C T G A G T C A

PF13_0315(RRM)/Plasmodium_falciparum-RNCMPT00200-PBM/HughesRNA

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTATGTAG
-CATGTAA
 A G T C A C G T C G T A A G C T A C T G A C G T C G T A A C T G
A C G T G A T C C G T A A C G T A C T G A G C T C G T A G T C A

HNRNPAB(RRM)/Tetraodon_nigroviridis-RNCMPT00245-PBM/HughesRNA

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTATGTAG
CTATCTA-
 A G T C A C G T C G T A A G C T A C T G A C G T C G T A A C T G
A G T C C G A T C G T A G C A T G T A C A G C T C G T A A C G T

DAZAP1(RRM)/Homo_sapiens-RNCMPT00013-PBM/HughesRNA

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTATGTAG
-TAGGTAG
 A G T C A C G T C G T A A G C T A C T G A C G T C G T A A C T G
A C G T A C G T C G T A C T A G C A T G C G A T C G T A C T A G

Tb_0252(RRM)/Trypanosoma_brucei-RNCMPT00252-PBM/HughesRNA

Match Rank:9
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTATGTAG--
---AGTAGAT
 A G T C A C G T C G T A A G C T A C T G A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G C T G A C G A T

Tb_0216(RRM)/Trypanosoma_brucei-RNCMPT00216-PBM/HughesRNA

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTATGTAG
NACAATG---
 A C G T A C G T A G T C A C G T C G T A A G C T A C T G A C G T C G T A A C T G
G C A T C G T A A G T C C G T A C G T A A C G T A C T G A C G T A C G T A C G T