Information for 25-TCTRTDCTGA (Motif 33)

A C G T A T G C A G C T T C G A A G C T C A T G A G T C A C G T C T A G C G T A
Reverse Opposite:
A C G T A G T C C G T A C T A G G T A C C T G A A G C T T C G A A T C G G T C A
p-value:1e0
log p-value:-0.000e+00
Information Content per bp:1.782
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif205.8
Percentage of Background Sequences with motif51.51%
Average Position of motif in Targets428.5 +/- 3.7bp
Average Position of motif in Background2797865.4 +/- 4219787.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TCTRTDCTGA----
----TGCTGACTCA
 A C G T A T G C A G C T T C G A A G C T C A T G A G T C A C G T C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Ot_0263(RRM)/Ostreococcus_tauri-RNCMPT00263-PBM/HughesRNA

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCTRTDCTGA
-TTGTTCT--
 A C G T A T G C A G C T T C G A A G C T C A T G A G T C A C G T C T A G C G T A
A C G T G A C T A G C T A C T G A C G T A C G T A G T C A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCTRTDCTGA----
AAAWWTGCTGACWWD
 A C G T A C G T A T G C A G C T T C G A A G C T C A T G A G T C A C G T C T A G C G T A A C G T A C G T A C G T A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

MEF2A/MA0052.4/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCTRTDCTGA---
NNTCTATTTTTAGNN
 A C G T A C G T A C G T A T G C A G C T T C G A A G C T C A T G A G T C A C G T C T A G C G T A A C G T A C G T A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

Mafb/MA0117.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCTRTDCTGA--
AAAATGCTGACT
 A C G T A T G C A G C T T C G A A G C T C A T G A G T C A C G T C T A G C G T A A C G T A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

NRL/MA0842.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCTRTDCTGA--
AAAAGTGCTGACG
 A C G T A C G T A T G C A G C T T C G A A G C T C A T G A G T C A C G T C T A G C G T A A C G T A C G T
C T G A C G T A C G T A G C T A C T A G G A C T C T A G T G A C A G C T C A T G C T G A A G T C C T A G

REF6/MA1415.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCTRTDCTGA
TNCTCTGTTTT--
 A C G T A C G T A C G T A C G T A T G C A G C T T C G A A G C T C A T G A G T C A C G T C T A G C G T A
C G A T T C A G G T A C G A C T T G A C A G C T C T A G A G C T C G A T G A C T G A C T A C G T A C G T

SWI5/Literature(Harbison)/Yeast

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TCTRTDCTGA
----GGCTGA
 A C G T A T G C A G C T T C G A A G C T C A T G A G T C A C G T C T A G C G T A
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T A G

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCTRTDCTGA------
AAATTTGCTGACTTAGA
 A C G T A C G T A T G C A G C T T C G A A G C T C A T G A G T C A C G T C T A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCTRTDCTGA-
--TATGCAAAT
 A C G T A T G C A G C T T C G A A G C T C A T G A G T C A C G T C T A G C G T A A C G T
A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T