Information for 4-AGAAAYTCCATT (Motif 4)

C G T A A C T G C G T A G T C A C G T A A G C T A C G T A G T C A G T C C T G A A C G T A C G T
Reverse Opposite:
C G T A C G T A A G C T A C T G A C T G C G T A C T G A A C G T A C G T A C G T A G T C A C G T
p-value:1e-43
log p-value:-1.002e+02
Information Content per bp:1.922
Number of Target Sequences with motif240.0
Percentage of Target Sequences with motif53.93%
Number of Background Sequences with motif41.6
Percentage of Background Sequences with motif10.42%
Average Position of motif in Targets64.3 +/- 5.1bp
Average Position of motif in Background3849099.6 +/- 3791456.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

sd/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AGAAAYTCCATT-
-CAAATTTCATTT
 C G T A A C T G C G T A G T C A C G T A A G C T A C G T A G T C A G T C C T G A A C G T A C G T A C G T
A C G T T A G C T C G A G C T A C G T A G A C T C A G T G A C T T A G C G C T A G C A T C G A T A C G T

Pp_0237(RRM)/Physcomitrella_patens-RNCMPT00237-PBM/HughesRNA

Match Rank:2
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:AGAAAYTCCATT
----ACTCCATC
 C G T A A C T G C G T A G T C A C G T A A G C T A C G T A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A T C A C G T A G T C A G T C C G T A C G A T G T A C

TEAD4/MA0809.2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGAAAYTCCATT
CCACATTCCAGG
 C G T A A C T G C G T A G T C A C G T A A G C T A C G T A G T C A G T C C T G A A C G T A C G T
G A T C G A T C C T G A T G A C G C T A A G C T C G A T A G T C G A T C G C T A C T A G T A C G

MOD(RRM)/Drosophila_melanogaster-RNCMPT00140-PBM/HughesRNA

Match Rank:4
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:AGAAAYTCCATT
-----TTCCACT
 C G T A A C T G C G T A G T C A C G T A A G C T A C G T A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C A G T C C G T A G A T C A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGAAAYTCCATT
--GCATTCCAGN
 C G T A A C T G C G T A G T C A C G T A A G C T A C G T A G T C A G T C C T G A A C G T A C G T
A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGAAAYTCCATT
-TRCATTCCAG-
 C G T A A C T G C G T A G T C A C G T A A G C T A C G T A G T C A G T C C T G A A C G T A C G T
A C G T A G C T C T A G T G A C C G T A A C G T C G A T A G T C A G T C C T G A C A T G A C G T

dl/dmmpmm(Down)/fly

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGAAAYTCCATT
GGAAAATCCA--
 C G T A A C T G C G T A G T C A C G T A A G C T A C G T A G T C A G T C C T G A A C G T A C G T
T C A G T C A G T C G A G T C A C G T A C G T A A G C T G T A C T A G C T C G A A C G T A C G T

CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGAAAYTCCATT--
--AAATTSAATTTN
 C G T A A C T G C G T A G T C A C G T A A G C T A C G T A G T C A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C T G A C G T A A G C T A G C T A T C G T C G A C T G A A C G T G A C T C G A T A C T G

TEAD3/MA0808.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGAAAYTCCATT
--ACATTCCA--
 C G T A A C T G C G T A G T C A C G T A A G C T A C G T A G T C A G T C C T G A A C G T A C G T
A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T

sd/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGAAAYTCCATT-
TCGAATTTCNTTG
 C G T A A C T G C G T A G T C A C G T A A G C T A C G T A G T C A G T C C T G A A C G T A C G T A C G T
C G A T T A G C T C A G G T C A C T G A G C A T C A G T G A C T T G A C C G T A C G A T C G A T A C G T