Information for 9-TAGGGCTGTGCA (Motif 9)

A C G T C G T A A T C G A C T G C T A G A G T C A G C T C T A G A G C T C T A G A G T C C T G A
Reverse Opposite:
A G C T C T A G A G T C C T G A G A T C T C G A C T A G A G T C A G T C A T G C A C G T C G T A
p-value:1e-35
log p-value:-8.238e+01
Information Content per bp:1.960
Number of Target Sequences with motif282.0
Percentage of Target Sequences with motif63.37%
Number of Background Sequences with motif84.9
Percentage of Background Sequences with motif21.26%
Average Position of motif in Targets188.6 +/- 21.3bp
Average Position of motif in Background3847289.9 +/- 4401933.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBF1/MA0403.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TAGGGCTGTGCA
NTAGGGTT-----
 A C G T A C G T C G T A A T C G A C T G C T A G A G T C A G C T C T A G A G C T C T A G A G T C C T G A
A G C T A G C T C T G A A C T G A C T G A C T G A G C T G C A T A C G T A C G T A C G T A C G T A C G T

Unknown2/Drosophila-Promoters/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TAGGGCTGTGCA
TAGKGATG----
 A C G T C G T A A T C G A C T G C T A G A G T C A G C T C T A G A G C T C T A G A G T C C T G A
A G C T C G T A A C T G A C G T A C T G G C T A A C G T A C T G A C G T A C G T A C G T A C G T

SNRPA(RRM)/Homo_sapiens-RNCMPT00071-PBM/HughesRNA

Match Rank:3
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TAGGGCTGTGCA-
------TGTGCAA
 A C G T C G T A A T C G A C T G C T A G A G T C A G C T C T A G A G C T C T A G A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C G T A C T G A G T C C G T A C G T A

MEC-8(RRM)/Caenorhabditis_elegans-RNCMPT00181-PBM/HughesRNA

Match Rank:4
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TAGGGCTGTGCA-
------TGTGCAN
 A C G T C G T A A T C G A C T G C T A G A G T C A G C T C T A G A G C T C T A G A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A G C A T

CPO(RRM)/Drosophila_melanogaster-RNCMPT00133-PBM/HughesRNA

Match Rank:5
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TAGGGCTGTGCA-
------TGTGCAN
 A C G T C G T A A T C G A C T G C T A G A G T C A G C T C T A G A G C T C T A G A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A G A C T

P0510F09.23/MA1030.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TAGGGCTGTGCA
NNNTAGGGTT-----
 A C G T A C G T A C G T A C G T C G T A A T C G A C T G C T A G A G T C A G C T C T A G A G C T C T A G A G T C C T G A
C T G A C A G T A G T C G A C T C G T A A C T G C A T G C A T G G A C T C G A T A C G T A C G T A C G T A C G T A C G T

TBP3(MYBrelated)/col-TBP3-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAGGGCTGTGCA
VYTAGGGCAN----
 A C G T A C G T A C G T C G T A A T C G A C T G C T A G A G T C A G C T C T A G A G C T C T A G A G T C C T G A
T C A G G A C T A C G T C G T A A C T G A C T G A C T G A G T C C G T A G T C A A C G T A C G T A C G T A C G T

Pr_0249(RRM)/Phytophthora_ramorum-RNCMPT00249-PBM/HughesRNA

Match Rank:8
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TAGGGCTGTGCA-
------TGTGCAA
 A C G T C G T A A T C G A C T G C T A G A G T C A G C T C T A G A G C T C T A G A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C G T A C T G A G T C C G T A C G T A

ZNF341/MA1655.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TAGGGCTGTGCA-
-NNGGCTGTTCCN
 A C G T C G T A A T C G A C T G C T A G A G T C A G C T C T A G A G C T C T A G A G T C C T G A A C G T
A C G T A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TAGGGCTGTGCA
----GCTGTG--
 A C G T C G T A A T C G A C T G C T A G A G T C A G C T C T A G A G C T C T A G A G T C C T G A
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T