Information for 13-ACCCATAAAGGG (Motif 13)

C G T A G T A C G T A C A G T C C T G A A C G T C T G A C G T A C G T A C T A G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A C G T G A C T C G T A A G C T C T A G A C T G C A T G G C A T
p-value:1e-485
log p-value:-1.117e+03
Information Content per bp:1.807
Number of Target Sequences with motif212.0
Percentage of Target Sequences with motif44.92%
Number of Background Sequences with motif49.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets45.9 +/- 51.6bp
Average Position of motif in Background128.1 +/- 56.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ACCCATAAAGGG
VGCCATAAAA--
 C G T A G T A C G T A C A G T C C T G A A C G T C T G A C G T A C G T A C T A G C T A G A C T G
T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A A C G T A C G T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ACCCATAAAGGG
-CYHATAAAAN-
 C G T A G T A C G T A C A G T C C T G A A C G T C T G A C G T A C G T A C T A G C T A G A C T G
A C G T T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ACCCATAAAGGG
--CCATATATGG
 C G T A G T A C G T A C A G T C C T G A A C G T C T G A C G T A C G T A C T A G C T A G A C T G
A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACCCATAAAGGG
GNCTATAAAAGG
 C G T A G T A C G T A C A G T C C T G A A C G T C T G A C G T A C G T A C T A G C T A G A C T G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACCCATAAAGGG
KGCCATAAAA--
 C G T A G T A C G T A C A G T C C T G A A C G T C T G A C G T A C G T A C T A G C T A G A C T G
C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACCCATAAAGGG
CCYMATAAAA--
 C G T A G T A C G T A C A G T C C T G A A C G T C T G A C G T A C G T A C T A G C T A G A C T G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACCCATAAAGGG
NCYAATAAAA--
 C G T A G T A C G T A C A G T C C T G A A C G T C T G A C G T A C G T A C T A G C T A G A C T G
C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACCCATAAAGGG
RGCAATNAAA--
 C G T A G T A C G T A C A G T C C T G A A C G T C T G A C G T A C G T A C T A G C T A G A C T G
C T A G T A C G G A T C G T C A T G C A A C G T T G C A G C T A T C G A T G C A A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACCCATAAAGGG--
--CCATATATGGNA
 C G T A G T A C G T A C A G T C C T G A A C G T C T G A C G T A C G T A C T A G C T A G A C T G A C G T A C G T
A C G T A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACCCATAAAGGG
GGCMATGAAA--
 C G T A G T A C G T A C A G T C C T G A A C G T C T G A C G T A C G T A C T A G C T A G A C T G
C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A A C G T A C G T