Information for 24-GAGATGCTGTTA (Motif 27)

A C T G C G T A A C T G C G T A A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C G T A G T C A C G T A G T C
p-value:1e-57
log p-value:-1.332e+02
Information Content per bp:1.530
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif4.66%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.9 +/- 29.3bp
Average Position of motif in Background88.0 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rhox11/MA0629.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAGATGCTGTTA-----
AAGACGCTGTAAAGCGA
 A C T G C G T A A C T G C G T A A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAGATGCTGTTA-----
AAGACGCTGTAAAGCGA
 A C T G C G T A A C T G C G T A A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAGATGCTGTTA-----
AGGACGCTGTAAAGGGA
 A C T G C G T A A C T G C G T A A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAGATGCTGTTA----
-AGATGCTRCTRCCHT
 A C T G C G T A A C T G C G T A A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

ZNF341/MA1655.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAGATGCTGTTA--
--NNGGCTGTTCCN
 A C T G C G T A A C T G C G T A A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C

JUN/MA0488.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGATGCTGTTA-
AAGATGATGTCAT
 A C T G C G T A A C T G C G T A A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGATGCTGTTA
-ACATCCTGNT-
 A C T G C G T A A C T G C G T A A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A
A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGATGCTGTTA-
--CATGCGGGTAC
 A C T G C G T A A C T G C G T A A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T
A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

JUND(var.2)/MA0492.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGATGCTGTTA--
AAAGATGATGTCATC
 A C G T A C T G C G T A A C T G C G T A A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A C G T
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAGATGCTGTTA
-----GCTGTG-
 A C T G C G T A A C T G C G T A A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T