Information for 24-AAAGACCT (Motif 29)

C G T A C G T A C G T A A C T G C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A G T C A C G T A C G T A C G T
p-value:1e-39
log p-value:-9.013e+01
Information Content per bp:1.530
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif11.65%
Number of Background Sequences with motif435.1
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets37.5 +/- 54.6bp
Average Position of motif in Background97.2 +/- 72.2bp
Strand Bias (log2 ratio + to - strand density)5.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H4/MA1110.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AAAGACCT-
TCAATGACCTA
 A C G T A C G T C G T A C G T A C G T A A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----AAAGACCT
GGTTAGAGACCT
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A G T C A G T C A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAAGACCT--
--AGGCCTNG
 C G T A C G T A C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

HNF4A/MA0114.4/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAGACCT--
TCCAAAGTCCAAA
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

HNF4G/MA0484.2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAGACCT--
TCCAAAGTCCAGA
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

NR1H4::RXRA/MA1146.1/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------AAAGACCT-
NAGGTCAATGACCTC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A G T C A G T C A C G T A C G T
T C G A T C G A C A T G C A T G A C G T A G T C T C G A C G T A G A C T T C A G T G C A G T A C G A T C A G C T A G T C

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AAAGACCT---
-ATGACCTTGA
 C G T A C G T A C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAAGACCT----
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

NR2C1/MA1535.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAAGACCT--
-NTGACCTCN
 C G T A C G T A C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAAGACCT---
NATGACCTTGA
 C G T A C G T A C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A