Information for 6-GGATTAGTAAAA (Motif 5)

T C A G A C T G C G T A C G A T A G C T T C G A C T A G A G C T C T G A C G T A C T G A C T G A
Reverse Opposite:
A G C T A G C T A C G T A G C T C T G A G A T C A G C T C T G A C G T A A C G T T G A C A G T C
p-value:1e-629
log p-value:-1.448e+03
Information Content per bp:1.937
Number of Target Sequences with motif292.0
Percentage of Target Sequences with motif61.86%
Number of Background Sequences with motif105.3
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets52.8 +/- 20.1bp
Average Position of motif in Background91.4 +/- 71.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX2/MA0712.2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GGATTAGTAAAA
AAGGGATTAGAA---
 A C G T A C G T A C G T T C A G A C T G C G T A C G A T A G C T T C G A C T A G A G C T C T G A C G T A C T G A C T G A
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A A C G T A C G T A C G T

PITX1/MA0682.2/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGATTAGTAAAA
NGGATTAN-----
 A C G T T C A G A C T G C G T A C G A T A G C T T C G A C T A G A G C T C T G A C G T A C T G A C T G A
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:3
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------GGATTAGTAAAA
TGAACCGGATTAATGAA-
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C T G C G T A C G A T A G C T T C G A C T A G A G C T C T G A C G T A C T G A C T G A
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------GGATTAGTAAAA
TGAACCGGATTAATGAA-
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C T G C G T A C G A T A G C T T C G A C T A G A G C T C T G A C G T A C T G A C T G A
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGATTAGTAAAA
NNGGATTAGN----
 A C G T A C G T T C A G A C T G C G T A C G A T A G C T T C G A C T A G A G C T C T G A C G T A C T G A C T G A
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGATTAGTAAAA
GGATTAGC----
 T C A G A C T G C G T A C G A T A G C T T C G A C T A G A G C T C T G A C G T A C T G A C T G A
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGATTAGTAAAA
RGGATTAR-----
 A C G T T C A G A C T G C G T A C G A T A G C T T C G A C T A G A G C T C T G A C G T A C T G A C T G A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGATTAGTAAAA
GGGATTANN----
 A C G T T C A G A C T G C G T A C G A T A G C T T C G A C T A G A G C T C T G A C G T A C T G A C T G A
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GGATTAGTAAAA
GNGGATTAGN----
 A C G T A C G T T C A G A C T G C G T A C G A T A G C T T C G A C T A G A G C T C T G A C G T A C T G A C T G A
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T

PITX2/MA1547.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGATTAGTAAAA
GGGATTAN-----
 A C G T T C A G A C T G C G T A C G A T A G C T T C G A C T A G A G C T C T G A C G T A C T G A C T G A
A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T A C G T A C G T A C G T A C G T A C G T