Information for 4-TCGGTGTAAA (Motif 8)

A G C T G A T C T C A G T A C G A C G T C T A G A C G T C G T A G T C A C T G A
Reverse Opposite:
A G C T A C G T A C G T C G T A A G T C C G T A A T G C A G T C C T A G C T G A
p-value:1e-559
log p-value:-1.289e+03
Information Content per bp:1.898
Number of Target Sequences with motif276.0
Percentage of Target Sequences with motif58.47%
Number of Background Sequences with motif130.0
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets125.7 +/- 24.4bp
Average Position of motif in Background93.1 +/- 76.4bp
Strand Bias (log2 ratio + to - strand density)7.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCGGTGTAAA----
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A G C T G A T C T C A G T A C G A C G T C T A G A C G T C G T A G T C A C T G A A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

TBX20/MA0689.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TCGGTGTAAA-
TAGGTGTGAAG
 A G C T G A T C T C A G T A C G A C G T C T A G A C G T C G T A G T C A C T G A A C G T
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TCGGTGTAAA----
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A G C T G A T C T C A G T A C G A C G T C T A G A C G T C G T A G T C A C T G A A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TCGGTGTAAA----
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A G C T G A T C T C A G T A C G A C G T C T A G A C G T C G T A G T C A C T G A A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCGGTGTAAA--------
---GTATAAAAGGCGGGG
 A G C T G A T C T C A G T A C G A C G T C T A G A C G T C G T A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCGGTGTAAA--------
---GTATAAAAGGCGGGG
 A G C T G A T C T C A G T A C G A C G T C T A G A C G T C G T A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCGGTGTAAA-
AAGGTGTGAAA
 A G C T G A T C T C A G T A C G A C G T C T A G A C G T C G T A G T C A C T G A A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCGGTGTAAA-
-AGGTGTTAAT
 A G C T G A T C T C A G T A C G A C G T C T A G A C G T C G T A G T C A C T G A A C G T
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCGGTGTAAA-
-AGGTGTGAAA
 A G C T G A T C T C A G T A C G A C G T C T A G A C G T C G T A G T C A C T G A A C G T
A C G T C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCGGTGTAAA-
-AGGTGTGAAA
 A G C T G A T C T C A G T A C G A C G T C T A G A C G T C G T A G T C A C T G A A C G T
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A