| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer | 1e-154 | -3.556e+02 | 0.0000 | 315.0 | 66.74% | 5863.3 | 13.54% | motif file (matrix) |
svg |
| 2 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-148 | -3.424e+02 | 0.0000 | 285.0 | 60.38% | 4668.5 | 10.78% | motif file (matrix) |
svg |
| 3 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-142 | -3.284e+02 | 0.0000 | 326.0 | 69.07% | 7059.9 | 16.31% | motif file (matrix) |
svg |
| 4 |
| Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer | 1e-134 | -3.095e+02 | 0.0000 | 265.0 | 56.14% | 4368.2 | 10.09% | motif file (matrix) |
svg |
| 5 |
| AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer | 1e-122 | -2.809e+02 | 0.0000 | 268.0 | 56.78% | 5062.8 | 11.69% | motif file (matrix) |
svg |
| 6 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-121 | -2.796e+02 | 0.0000 | 297.0 | 62.92% | 6598.9 | 15.24% | motif file (matrix) |
svg |
| 7 |
| TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer | 1e-118 | -2.736e+02 | 0.0000 | 338.0 | 71.61% | 9305.3 | 21.49% | motif file (matrix) |
svg |
| 8 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-112 | -2.602e+02 | 0.0000 | 208.0 | 44.07% | 2897.0 | 6.69% | motif file (matrix) |
svg |
| 9 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-109 | -2.521e+02 | 0.0000 | 195.0 | 41.31% | 2552.3 | 5.90% | motif file (matrix) |
svg |
| 10 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-106 | -2.448e+02 | 0.0000 | 231.0 | 48.94% | 4095.8 | 9.46% | motif file (matrix) |
svg |
| 11 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-106 | -2.442e+02 | 0.0000 | 269.0 | 56.99% | 5959.2 | 13.76% | motif file (matrix) |
svg |
| 12 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-88 | -2.035e+02 | 0.0000 | 208.0 | 44.07% | 3931.1 | 9.08% | motif file (matrix) |
svg |
| 13 |
| ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer | 1e-87 | -2.019e+02 | 0.0000 | 89.0 | 18.86% | 369.7 | 0.85% | motif file (matrix) |
svg |
| 14 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-86 | -1.998e+02 | 0.0000 | 211.0 | 44.70% | 4148.1 | 9.58% | motif file (matrix) |
svg |
| 15 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-82 | -1.908e+02 | 0.0000 | 213.0 | 45.13% | 4453.0 | 10.28% | motif file (matrix) |
svg |
| 16 |
| TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer | 1e-78 | -1.815e+02 | 0.0000 | 200.0 | 42.37% | 4064.7 | 9.39% | motif file (matrix) |
svg |
| 17 |
| ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer | 1e-77 | -1.794e+02 | 0.0000 | 237.0 | 50.21% | 6000.1 | 13.86% | motif file (matrix) |
svg |
| 18 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-77 | -1.792e+02 | 0.0000 | 375.0 | 79.45% | 16100.5 | 37.19% | motif file (matrix) |
svg |
| 19 |
| TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer | 1e-65 | -1.509e+02 | 0.0000 | 198.0 | 41.95% | 4766.3 | 11.01% | motif file (matrix) |
svg |
| 20 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-63 | -1.461e+02 | 0.0000 | 153.0 | 32.42% | 2799.8 | 6.47% | motif file (matrix) |
svg |
| 21 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-56 | -1.292e+02 | 0.0000 | 161.0 | 34.11% | 3555.1 | 8.21% | motif file (matrix) |
svg |
| 22 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-55 | -1.283e+02 | 0.0000 | 261.0 | 55.30% | 9422.5 | 21.76% | motif file (matrix) |
svg |
| 23 |
| Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer | 1e-55 | -1.279e+02 | 0.0000 | 310.0 | 65.68% | 13128.5 | 30.32% | motif file (matrix) |
svg |
| 24 |
| ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-52 | -1.203e+02 | 0.0000 | 239.0 | 50.64% | 8300.0 | 19.17% | motif file (matrix) |
svg |
| 25 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-49 | -1.134e+02 | 0.0000 | 241.0 | 51.06% | 8755.1 | 20.22% | motif file (matrix) |
svg |
| 26 |
| Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer | 1e-41 | -9.538e+01 | 0.0000 | 237.0 | 50.21% | 9397.2 | 21.70% | motif file (matrix) |
svg |
| 27 |
| BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer | 1e-40 | -9.294e+01 | 0.0000 | 168.0 | 35.59% | 5107.9 | 11.80% | motif file (matrix) |
svg |
| 28 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-36 | -8.296e+01 | 0.0000 | 140.0 | 29.66% | 3950.1 | 9.12% | motif file (matrix) |
svg |
| 29 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-31 | -7.155e+01 | 0.0000 | 61.0 | 12.92% | 810.9 | 1.87% | motif file (matrix) |
svg |
| 30 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-30 | -7.095e+01 | 0.0000 | 274.0 | 58.05% | 13815.6 | 31.91% | motif file (matrix) |
svg |
| 31 |
| Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer | 1e-30 | -7.084e+01 | 0.0000 | 120.0 | 25.42% | 3346.5 | 7.73% | motif file (matrix) |
svg |
| 32 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-30 | -6.983e+01 | 0.0000 | 180.0 | 38.14% | 6933.1 | 16.01% | motif file (matrix) |
svg |
| 33 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-29 | -6.749e+01 | 0.0000 | 101.0 | 21.40% | 2513.4 | 5.81% | motif file (matrix) |
svg |
| 34 |
| EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer | 1e-27 | -6.398e+01 | 0.0000 | 133.0 | 28.18% | 4338.1 | 10.02% | motif file (matrix) |
svg |
| 35 |
| Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer | 1e-27 | -6.375e+01 | 0.0000 | 220.0 | 46.61% | 10114.3 | 23.36% | motif file (matrix) |
svg |
| 36 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-24 | -5.702e+01 | 0.0000 | 110.0 | 23.31% | 3358.3 | 7.76% | motif file (matrix) |
svg |
| 37 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-24 | -5.585e+01 | 0.0000 | 103.0 | 21.82% | 3031.5 | 7.00% | motif file (matrix) |
svg |
| 38 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-23 | -5.510e+01 | 0.0000 | 111.0 | 23.52% | 3495.6 | 8.07% | motif file (matrix) |
svg |
| 39 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-22 | -5.187e+01 | 0.0000 | 145.0 | 30.72% | 5697.1 | 13.16% | motif file (matrix) |
svg |
| 40 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-20 | -4.630e+01 | 0.0000 | 97.0 | 20.55% | 3114.9 | 7.19% | motif file (matrix) |
svg |
| 41 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-19 | -4.464e+01 | 0.0000 | 113.0 | 23.94% | 4121.7 | 9.52% | motif file (matrix) |
svg |
| 42 |
| E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer | 1e-18 | -4.199e+01 | 0.0000 | 42.0 | 8.90% | 683.0 | 1.58% | motif file (matrix) |
svg |
| 43 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-16 | -3.741e+01 | 0.0000 | 329.0 | 69.70% | 21991.6 | 50.79% | motif file (matrix) |
svg |
| 44 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.565e+01 | 0.0000 | 52.0 | 11.02% | 1245.5 | 2.88% | motif file (matrix) |
svg |
| 45 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-14 | -3.428e+01 | 0.0000 | 99.0 | 20.97% | 3866.0 | 8.93% | motif file (matrix) |
svg |
| 46 |
| Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer | 1e-14 | -3.420e+01 | 0.0000 | 116.0 | 24.58% | 4953.8 | 11.44% | motif file (matrix) |
svg |
| 47 |
| Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer | 1e-14 | -3.378e+01 | 0.0000 | 186.0 | 39.41% | 10009.2 | 23.12% | motif file (matrix) |
svg |
| 48 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-12 | -2.928e+01 | 0.0000 | 150.0 | 31.78% | 7731.9 | 17.86% | motif file (matrix) |
svg |
| 49 |
| TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer | 1e-11 | -2.574e+01 | 0.0000 | 121.0 | 25.64% | 5967.5 | 13.78% | motif file (matrix) |
svg |
| 50 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-10 | -2.414e+01 | 0.0000 | 198.0 | 41.95% | 12049.6 | 27.83% | motif file (matrix) |
svg |
| 51 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-9 | -2.223e+01 | 0.0000 | 245.0 | 51.91% | 16303.7 | 37.66% | motif file (matrix) |
svg |
| 52 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-8 | -2.032e+01 | 0.0000 | 115.0 | 24.36% | 6063.7 | 14.01% | motif file (matrix) |
svg |
| 53 |
| Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer | 1e-8 | -1.889e+01 | 0.0000 | 122.0 | 25.85% | 6737.0 | 15.56% | motif file (matrix) |
svg |
| 54 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-8 | -1.868e+01 | 0.0000 | 111.0 | 23.52% | 5946.2 | 13.73% | motif file (matrix) |
svg |
| 55 |
| Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer | 1e-7 | -1.840e+01 | 0.0000 | 20.0 | 4.24% | 373.8 | 0.86% | motif file (matrix) |
svg |
| 56 |
| Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer | 1e-7 | -1.807e+01 | 0.0000 | 151.0 | 31.99% | 9069.2 | 20.95% | motif file (matrix) |
svg |
| 57 |
| TATA-Box(TBP)/Promoter/Homer | 1e-6 | -1.540e+01 | 0.0000 | 97.0 | 20.55% | 5288.5 | 12.21% | motif file (matrix) |
svg |
| 58 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-6 | -1.488e+01 | 0.0000 | 30.0 | 6.36% | 951.3 | 2.20% | motif file (matrix) |
svg |
| 59 |
| E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.463e+01 | 0.0000 | 50.0 | 10.59% | 2132.8 | 4.93% | motif file (matrix) |
svg |
| 60 |
| PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-6 | -1.401e+01 | 0.0000 | 120.0 | 25.42% | 7202.7 | 16.64% | motif file (matrix) |
svg |
| 61 |
| Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-5 | -1.370e+01 | 0.0000 | 13.0 | 2.75% | 216.8 | 0.50% | motif file (matrix) |
svg |
| 62 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-5 | -1.301e+01 | 0.0000 | 47.0 | 9.96% | 2065.8 | 4.77% | motif file (matrix) |
svg |
| 63 |
| Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer | 1e-5 | -1.293e+01 | 0.0000 | 44.0 | 9.32% | 1881.0 | 4.34% | motif file (matrix) |
svg |
| 64 |
| Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer | 1e-5 | -1.280e+01 | 0.0000 | 85.0 | 18.01% | 4715.9 | 10.89% | motif file (matrix) |
svg |
| 65 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-5 | -1.266e+01 | 0.0000 | 49.0 | 10.38% | 2222.5 | 5.13% | motif file (matrix) |
svg |
| 66 |
| Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer | 1e-5 | -1.263e+01 | 0.0000 | 89.0 | 18.86% | 5031.2 | 11.62% | motif file (matrix) |
svg |
| 67 |
| Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer | 1e-5 | -1.221e+01 | 0.0000 | 105.0 | 22.25% | 6297.3 | 14.54% | motif file (matrix) |
svg |
| 68 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-5 | -1.158e+01 | 0.0001 | 59.0 | 12.50% | 2993.5 | 6.91% | motif file (matrix) |
svg |
| 69 |
| SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer | 1e-5 | -1.153e+01 | 0.0001 | 33.0 | 6.99% | 1304.9 | 3.01% | motif file (matrix) |
svg |
| 70 |
| LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer | 1e-4 | -1.143e+01 | 0.0001 | 110.0 | 23.31% | 6801.4 | 15.71% | motif file (matrix) |
svg |
| 71 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-4 | -1.140e+01 | 0.0001 | 25.0 | 5.30% | 852.9 | 1.97% | motif file (matrix) |
svg |
| 72 |
| HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer | 1e-4 | -1.130e+01 | 0.0001 | 17.0 | 3.60% | 447.3 | 1.03% | motif file (matrix) |
svg |
| 73 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-4 | -1.031e+01 | 0.0002 | 81.0 | 17.16% | 4738.2 | 10.94% | motif file (matrix) |
svg |
| 74 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-3 | -9.043e+00 | 0.0007 | 21.0 | 4.45% | 756.4 | 1.75% | motif file (matrix) |
svg |
| 75 |
| Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer | 1e-3 | -8.642e+00 | 0.0010 | 82.0 | 17.37% | 5060.9 | 11.69% | motif file (matrix) |
svg |
| 76 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-3 | -7.789e+00 | 0.0024 | 30.0 | 6.36% | 1396.5 | 3.23% | motif file (matrix) |
svg |
| 77 |
| Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer | 1e-2 | -6.891e+00 | 0.0058 | 18.0 | 3.81% | 711.2 | 1.64% | motif file (matrix) |
svg |
| 78 |
| RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-2 | -6.731e+00 | 0.0067 | 15.0 | 3.18% | 546.9 | 1.26% | motif file (matrix) |
svg |
| 79 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-2 | -6.379e+00 | 0.0094 | 34.0 | 7.20% | 1808.0 | 4.18% | motif file (matrix) |
svg |
| 80 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.700e+00 | 0.0184 | 139.0 | 29.45% | 10352.0 | 23.91% | motif file (matrix) |
svg |
| 81 |
| HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-2 | -5.675e+00 | 0.0186 | 24.0 | 5.08% | 1191.5 | 2.75% | motif file (matrix) |
svg |
| 82 |
| Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -5.629e+00 | 0.0193 | 59.0 | 12.50% | 3780.1 | 8.73% | motif file (matrix) |
svg |
| 83 |
| DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer | 1e-2 | -5.594e+00 | 0.0197 | 6.0 | 1.27% | 133.3 | 0.31% | motif file (matrix) |
svg |
| 84 |
| Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer | 1e-2 | -5.565e+00 | 0.0201 | 71.0 | 15.04% | 4739.3 | 10.95% | motif file (matrix) |
svg |
| 85 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -5.473e+00 | 0.0217 | 31.0 | 6.57% | 1700.2 | 3.93% | motif file (matrix) |
svg |
| 86 |
| ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer | 1e-2 | -5.342e+00 | 0.0245 | 79.0 | 16.74% | 5429.1 | 12.54% | motif file (matrix) |
svg |
| 87 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.335e+00 | 0.0245 | 98.0 | 20.76% | 6990.3 | 16.15% | motif file (matrix) |
svg |
| 88 |
| CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer | 1e-2 | -5.042e+00 | 0.0323 | 37.0 | 7.84% | 2195.5 | 5.07% | motif file (matrix) |
svg |
| 89 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-2 | -4.910e+00 | 0.0364 | 18.0 | 3.81% | 861.1 | 1.99% | motif file (matrix) |
svg |