Information for 14-ACCCGTAAAG (Motif 14)

C T G A G T A C A G T C A G T C C T A G A C G T C T G A C G T A C T G A C T A G
Reverse Opposite:
A G T C A G C T A C G T A G C T C G T A G A T C T C A G C T A G A C T G A G C T
p-value:1e-411
log p-value:-9.465e+02
Information Content per bp:1.900
Number of Target Sequences with motif213.0
Percentage of Target Sequences with motif45.13%
Number of Background Sequences with motif113.8
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets40.3 +/- 45.4bp
Average Position of motif in Background104.1 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)5.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ACCCGTAAAG-
-CYHATAAAAN
 C T G A G T A C A G T C A G T C C T A G A C G T C T G A C G T A C T G A C T A G A C G T
A C G T T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ACCCGTAAAG
VGCCATAAAA
 C T G A G T A C A G T C A G T C C T A G A C G T C T G A C G T A C T G A C T A G
T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACCCGTAAAG--
NGYCATAAAWCH
 C T G A G T A C A G T C A G T C C T A G A C G T C T G A C G T A C T G A C T A G A C G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACCCGTAAAG
CCYMATAAAA
 C T G A G T A C A G T C A G T C C T A G A C G T C T G A C G T A C T G A C T A G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACCCGTAAAG
NCYAATAAAA
 C T G A G T A C A G T C A G T C C T A G A C G T C T G A C G T A C T G A C T A G
C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

HOXA13/MA0650.2/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACCCGTAAAG-
CCCAATAAAAC
 C T G A G T A C A G T C A G T C C T A G A C G T C T G A C G T A C T G A C T A G A C G T
T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACCCGTAAAG
KGCCATAAAA
 C T G A G T A C A G T C A G T C C T A G A C G T C T G A C G T A C T G A C T A G
C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ACCCGTAAAG---
AAACCTCGTAAAATTT
 A C G T A C G T A C G T C T G A G T A C A G T C A G T C C T A G A C G T C T G A C G T A C T G A C T A G A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACCCGTAAAG-
GCTCGTAAAAA
 C T G A G T A C A G T C A G T C C T A G A C G T C T G A C G T A C T G A C T A G A C G T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACCCGTAAAG
RGCAATNAAA
 C T G A G T A C A G T C A G T C C T A G A C G T C T G A C G T A C T G A C T A G
C T A G T A C G G A T C G T C A T G C A A C G T T G C A G C T A T C G A T G C A