Information for 16-CCGATTGTACAT (Motif 15)

G A T C G A T C C T A G C G T A G A C T A G C T C A T G A G C T C G T A A G T C C G T A A G C T
Reverse Opposite:
C T G A A C G T A C T G A C G T C T G A G T A C C T G A C T G A A C G T G A T C C T A G C T A G
p-value:1e-403
log p-value:-9.283e+02
Information Content per bp:1.929
Number of Target Sequences with motif136.0
Percentage of Target Sequences with motif28.81%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets139.4 +/- 12.7bp
Average Position of motif in Background154.5 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCGATTGTACAT-
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A C G T G A T C G A T C C T A G C G T A G A C T A G C T C A T G A G C T C G T A A G T C C G T A A G C T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

SOX9/MA0077.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCGATTGTACAT
-CCATTGTTC--
 G A T C G A T C C T A G C G T A G A C T A G C T C A T G A G C T C G T A A G T C C G T A A G C T
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCGATTGTACAT---
AATCAATTGTTCCGCTA
 A C G T A C G T G A T C G A T C C T A G C G T A G A C T A G C T C A T G A G C T C G T A A G T C C G T A A G C T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCGATTGTACAT
NCCATTGTTC--
 G A T C G A T C C T A G C G T A G A C T A G C T C A T G A G C T C G T A A G T C C G T A A G C T
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCGATTGTACAT---
CNNNTATTGTTCNNNNN
 A C G T A C G T G A T C G A T C C T A G C G T A G A C T A G C T C A T G A G C T C G T A A G T C C G T A A G C T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCGATTGTACAT-
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T G A T C G A T C C T A G C G T A G A C T A G C T C A T G A G C T C G T A A G T C C G T A A G C T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

SOX2/MA0143.4/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCGATTGTACAT
NNCCATTGTNN--
 A C G T G A T C G A T C C T A G C G T A G A C T A G C T C A T G A G C T C G T A A G T C C G T A A G C T
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCGATTGTACAT
NNCCATTGTNN--
 A C G T G A T C G A T C C T A G C G T A G A C T A G C T C A T G A G C T C G T A A G T C C G T A A G C T
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T

SOX8/MA0868.2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCGATTGTACAT
-CCATTGTTCT-
 G A T C G A T C C T A G C G T A G A C T A G C T C A T G A G C T C G T A A G T C C G T A A G C T
A C G T A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCGATTGTACAT--
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T G A T C G A T C C T A G C G T A G A C T A G C T C A T G A G C T C G T A A G T C C G T A A G C T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A