Information for 3-TAGTGAAA (Motif 16)

A C G T C G T A A C T G A G C T C T A G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C C T G A A G T C A C G T C G T A
p-value:1e-382
log p-value:-8.810e+02
Information Content per bp:1.939
Number of Target Sequences with motif278.0
Percentage of Target Sequences with motif58.90%
Number of Background Sequences with motif590.8
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets63.7 +/- 36.8bp
Average Position of motif in Background99.2 +/- 73.0bp
Strand Bias (log2 ratio + to - strand density)6.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TAGTGAAA--
GAAAGTGAAAGT
 A C G T A C G T A C G T C G T A A C T G A G C T C T A G C G T A C G T A C G T A A C G T A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TAGTGAAA-
HDGYAATGAAAN
 A C G T A C G T A C G T A C G T C G T A A C T G A G C T C T A G C G T A C G T A C G T A A C G T
G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TAGTGAAA-
GTCGTAAAAA
 A C G T A C G T C G T A A C T G A G C T C T A G C G T A C G T A C G T A A C G T
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TAGTGAAA-
GGTCGTAAAAA
 A C G T A C G T A C G T C G T A A C T G A G C T C T A G C G T A C G T A C G T A A C G T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAGTGAAA
ACTAGTTAAC
 A C G T A C G T A C G T C G T A A C T G A G C T C T A G C G T A C G T A C G T A
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAGTGAAA
GGYAATGAAA
 A C G T A C G T A C G T C G T A A C T G A G C T C T A G C G T A C G T A C G T A
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A

HOXC11/MA0651.1/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAGTGAAA-
GGTCGTAAAAT
 A C G T A C G T A C G T C G T A A C T G A G C T C T A G C G T A C G T A C G T A A C G T
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TAGTGAAA-
CYHATAAAAN
 A C G T A C G T C G T A A C T G A G C T C T A G C G T A C G T A C G T A A C G T
T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TAGTGAAA
GGCMATGAAA
 A C G T A C G T A C G T C G T A A C T G A G C T C T A G C G T A C G T A C G T A
C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TAGTGAAA-
AGTCGTAAAAA
 A C G T A C G T A C G T C G T A A C T G A G C T C T A G C G T A C G T A C G T A A C G T
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A