Information for 17-CAGGGATGWGCA (Motif 18)

A G T C G T C A A C T G A C T G A C T G G T C A A G C T C T A G C G T A C T A G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G A T G A T C C T G A A C G T A G T C A G T C A G T C A C G T C T A G
p-value:1e-290
log p-value:-6.679e+02
Information Content per bp:1.848
Number of Target Sequences with motif135.0
Percentage of Target Sequences with motif28.60%
Number of Background Sequences with motif39.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets102.5 +/- 43.1bp
Average Position of motif in Background103.2 +/- 59.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0137.1_Pitx1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAGGGATGWGCA--
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T A G T C G T C A A C T G A C T G A C T G G T C A A G C T C T A G C G T A C T A G A G T C C G T A A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAGGGATGWGCA
TGGGGAAGGGCM
 A G T C G T C A A C T G A C T G A C T G G T C A A G C T C T A G C G T A C T A G A G T C C G T A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGGGATGWGCA
CCWGGAATGY---
 A C G T A G T C G T C A A C T G A C T G A C T G G T C A A G C T C T A G C G T A C T A G A G T C C G T A
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGGGATGWGCA------
-NNGTATGTGCACATNNN
 A G T C G T C A A C T G A C T G A C T G G T C A A G C T C T A G C G T A C T A G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PH0139.1_Pitx3/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGGGATGWGCA---
AGGGGGATTAGCTGCC
 A C G T A G T C G T C A A C T G A C T G A C T G G T C A A G C T C T A G C G T A C T A G A G T C C G T A A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGGGATGWGCA
--TGGAACAGMA
 A G T C G T C A A C T G A C T G A C T G G T C A A G C T C T A G C G T A C T A G A G T C C G T A
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

PH0035.1_Gsc/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGATGWGCA---
NNAAGGGATTAACGANT
 A C G T A C G T A G T C G T C A A C T G A C T G A C T G G T C A A G C T C T A G C G T A C T A G A G T C C G T A A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

ZNF263/MA0528.2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGGGATGWGCA
GGGGGGAGGAGG-
 A C G T A G T C G T C A A C T G A C T G A C T G G T C A A G C T C T A G C G T A C T A G A G T C C G T A
T C A G A T C G C T A G T A C G A T C G A C T G G T C A A C T G A T C G T G C A T A C G A T C G A C G T

OTX2/MA0712.2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGGGATGWGCA
AAGGGATTAGAA
 A G T C G T C A A C T G A C T G A C T G G T C A A G C T C T A G C G T A C T A G A G T C C G T A
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CAGGGATGWGCA
---GGATTAGC-
 A G T C G T C A A C T G A C T G A C T G G T C A A G C T C T A G C G T A C T A G A G T C C G T A
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T