Information for 25-CTAYRTAGAM (Motif 28)

A G T C A C G T C G T A A G C T C T A G A C G T C G T A A C T G C G T A G T C A
Reverse Opposite:
A C G T A C G T A G T C A C G T C G T A A G T C C T G A A C G T C G T A A C T G
p-value:1e-56
log p-value:-1.290e+02
Information Content per bp:1.886
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif6.14%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets70.0 +/- 32.9bp
Average Position of motif in Background130.7 +/- 92.2bp
Strand Bias (log2 ratio + to - strand density)3.9
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN29/MA1602.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTAYRTAGAM-
NCNGTGTAGACG
 A C G T A G T C A C G T C G T A A G C T C T A G A C G T C G T A A C T G C G T A G T C A A C G T
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G

FOXD2/MA0847.2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTAYRTAGAM--
GTTAAGTAAACAA
 A C G T A G T C A C G T C G T A A G C T C T A G A C G T C G T A A C T G C G T A G T C A A C G T A C G T
T A C G G A C T G C A T T C G A G C T A T C A G G A C T G T C A T G C A C G T A A G T C C G T A G C T A

ARGFX/MA1463.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTAYRTAGAM
TCTAATTAAA-
 A C G T A G T C A C G T C G T A A G C T C T A G A C G T C G T A A C T G C G T A G T C A
C A G T G A T C G A C T G T C A C G T A A C G T A G C T C T G A C T G A G T C A A C G T

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTAYRTAGAM-
GCTAARTAAACA
 A C G T A G T C A C G T C G T A A G C T C T A G A C G T C G T A A C T G C G T A G T C A A C G T
A T C G G A T C G C A T T C G A G C T A T C G A G C A T G T C A C G T A G T C A G A T C G C T A

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTAYRTAGAM-
-TGTCTAGACG
 A G T C A C G T C G T A A G C T C T A G A C G T C G T A A C T G C G T A G T C A A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

PB0198.1_Zfp128_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTAYRTAGAM-
NNTATANATATACN
 A C G T A C G T A C G T A G T C A C G T C G T A A G C T C T A G A C G T C G T A A C T G C G T A G T C A A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

PH0034.1_Gbx2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CTAYRTAGAM--
AANCGCTAATTAGCNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G C T C T A G A C G T C G T A A C T G C G T A G T C A A C G T A C G T
G T C A T G C A G A C T A T G C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C A C T G A T G C G C A T

Foxl2/MA1607.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTAYRTAGAM---
AATATGTAAACAAA
 A C G T A G T C A C G T C G T A A G C T C T A G A C G T C G T A A C T G C G T A G T C A A C G T A C G T A C G T
C T G A C G T A C G A T C G T A C G A T C T A G C G A T G T C A G C T A C T G A G A T C G C T A G C T A T C G A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTAYRTAGAM------
NNGATCTAGAACCTNNN
 A C G T A G T C A C G T C G T A A G C T C T A G A C G T C G T A A C T G C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTAYRTAGAM----
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A G T C A C G T C G T A A G C T C T A G A C G T C G T A A C T G C G T A G T C A A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T