Information for 4-TGCAGTTGAGAT (Motif 4)

A C G T A C T G G A T C C T G A C T A G A G C T A G C T T C A G C T G A T A C G C T G A A C G T
Reverse Opposite:
C G T A G A C T A G T C A G C T A G T C C T G A C T G A A G T C G A C T C A T G A G T C C G T A
p-value:1e-696
log p-value:-1.603e+03
Information Content per bp:1.862
Number of Target Sequences with motif258.0
Percentage of Target Sequences with motif54.66%
Number of Background Sequences with motif25.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets77.0 +/- 18.1bp
Average Position of motif in Background96.4 +/- 75.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB/MA0100.3/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGCAGTTGAGAT
NNCAGTTGNN--
 A C G T A C T G G A T C C T G A C T A G A G C T A G C T T C A G C T G A T A C G C T G A A C G T
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCAGTTGAGAT
CGCAGCTGCG--
 A C G T A C T G G A T C C T G A C T A G A G C T A G C T T C A G C T G A T A C G C T G A A C G T
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGTTGAGAT
NNGCAGGTGNN--
 A C G T A C G T A C T G G A T C C T G A C T A G A G C T A G C T T C A G C T G A T A C G C T G A A C G T
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G A C G T A C G T

TCF3/MA0522.3/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGTTGAGAT
NNGCAGGTGNN--
 A C G T A C G T A C T G G A T C C T G A C T A G A G C T A G C T T C A G C T G A T A C G C T G A A C G T
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAGTTGAGAT
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C C T G A C T A G A G C T A G C T T C A G C T G A T A C G C T G A A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

RUNX3/MA0684.2/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGCAGTTGAGAT---
---NNTTGAGGTTNN
 A C G T A C T G G A T C C T G A C T A G A G C T A G C T T C A G C T G A T A C G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCAGTTGAGAT
CGCAGCTGCG--
 A C G T A C T G G A T C C T G A C T A G A G C T A G C T T C A G C T G A T A C G C T G A A C G T
A T G C T A C G A G T C T C G A A T C G T A G C A G C T T A C G A T G C T A C G A C G T A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGTTGAGAT
NNGCAGGTGNN--
 A C G T A C G T A C T G G A T C C T G A C T A G A G C T A G C T T C A G C T G A T A C G C T G A A C G T
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCAGTTGAGAT
-GCAGCTGTNN-
 A C G T A C T G G A T C C T G A C T A G A G C T A G C T T C A G C T G A T A C G C T G A A C G T
A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCAGTTGAGAT
TGGCAGTTGG---
 A C G T A C G T A C T G G A T C C T G A C T A G A G C T A G C T T C A G C T G A T A C G C T G A A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T