Information for 6-TCAGWATARAAC (Motif 6)

A C G T A G T C C T G A A C T G C G T A C T G A A C G T C G T A C T A G C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A G T C C G A T C G T A A G C T C G A T A G T C A G C T A C T G C G T A
p-value:1e-638
log p-value:-1.470e+03
Information Content per bp:1.872
Number of Target Sequences with motif276.0
Percentage of Target Sequences with motif58.47%
Number of Background Sequences with motif67.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets137.3 +/- 26.4bp
Average Position of motif in Background91.2 +/- 75.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCAGWATARAAC--
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G C G T A C T G A A C G T C G T A C T A G C G T A C G T A A G T C A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

HOXD13/MA0909.2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCAGWATARAAC
-CCCAATAAAAC
 A C G T A G T C C T G A A C T G C G T A C T G A A C G T C G T A C T A G C G T A C G T A A G T C
A C G T T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCAGWATARAAC
BAGTCATANTGAAAG
 A C G T A C G T A C G T A C G T A G T C C T G A A C T G C G T A C T G A A C G T C G T A C T A G C G T A C G T A A G T C
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCAGWATARAAC---
TATCATTAGAACGCT
 A C G T A G T C C T G A A C T G C G T A C T G A A C G T C G T A C T A G C G T A C G T A A G T C A C G T A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCAGWATARAAC------
---GTATAAAAGGCGGGG
 A C G T A G T C C T G A A C T G C G T A C T G A A C G T C G T A C T A G C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCAGWATARAAC------
---GTATAAAAGGCGGGG
 A C G T A G T C C T G A A C T G C G T A C T G A A C G T C G T A C T A G C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

HOXA13/MA0650.2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCAGWATARAAC
-CCCAATAAAAC
 A C G T A G T C C T G A A C T G C G T A C T G A A C G T C G T A C T A G C G T A C G T A A G T C
A C G T T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

Arid3a/MA0151.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TCAGWATARAAC
-----ATTAAA-
 A C G T A G T C C T G A A C T G C G T A C T G A A C G T C G T A C T A G C G T A C G T A A G T C
A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCAGWATARAAC---
CTACCAATAAAATTCT
 A C G T A C G T A G T C C T G A A C T G C G T A C T G A A C G T C G T A C T A G C G T A C G T A A G T C A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXD9/MA0913.2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCAGWATARAAC
--GCAATAAAAC
 A C G T A G T C C T G A A C T G C G T A C T G A A C G T C G T A C T A G C G T A C G T A A G T C
A C G T A C G T T C A G A G T C G T C A T C G A C G A T G C T A C G T A C G T A G T C A G A T C